RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA520845" and tax_phylum = "Pisuviricota"

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tax_superkingdom 1

tax_phylum 1

  • Pisuviricota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA520845 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
23444873 23444873 PRJNA520845_P_NODE_59_length_8272_cov_72.906696_g33_i0 PRJNA520845 59 8272 72.906696 6030.84189312 Marnaviridae sp. 2715102 Viruses Viruses 2099 0   NR ULF99949.1 2715102 g33 i0 67.7 0.554158607350097 1528 466 55.3 8 800 5371 18 1522 ULF99949.1 MAG: hypothetical protein 1 [Marnaviridae sp.] diamond 4584 2099 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Marnaviridae   Marnaviridae sp.
27361973 27361973 PRJNA520845_P_NODE_184363_length_274_cov_1.532338_g182864_i0 PRJNA520845 184363 274 1.532338 4.19860612 Striga asiatica dicistro-like virus 1 2943843 Viruses Viruses 177 8.8e-50   NR UQR78685.1 2943843 g182864 i0 87.9 0.996350364963504 91 11 99.6 0 274 2 130 220 UQR78685.1 structural polyprotein, partial [Striga asiatica dicistro-like virus 1] diamond 273 177 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Dicistroviridae   Striga asiatica dicistro-like virus 1

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;