RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA520845" and tax_phylum = "Negarnaviricota"

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tax_superkingdom 1

tax_phylum 1

  • Negarnaviricota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA520845 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
14522309 14522309 PRJNA520845_P_NODE_9632_length_1260_cov_2.516428_g8747_i0 PRJNA520845 9632 1260 2.516428 31.7069928 brine shrimp arlivirus 8 2900383 Viruses Viruses 403 4.95e-135   NR UNI74120.1 2900383 g8747 i0 52.3 0.873809523809524 367 175 87.4 0 46 1146 1 367 UNI74120.1 MAG: hypothetical protein [brine shrimp arlivirus 8] diamond 1101 403 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Lispiviridae Artemvirus Artemvirus bsaeighalis
27456659 27456659 PRJNA520845_P_NODE_138883_length_317_cov_1.262295_g137384_i0 PRJNA520845 138883 317 1.262295 4.00147515 Rhizoctonia cerealis bunyavirus 3068840 Viruses Viruses 46.6 0.00414   NR WMI40150.1 3068840 g137384 i0 33.3 0.851735015772871 90 58 85.2 2 289 20 1495 1582 WMI40150.1 MAG: RNA-dependent RNA polymerase [Rhizoctonia cerealis bunyavirus] diamond 270 46.6 1 Viruses   Orthornavirae Negarnaviricota Ellioviricetes Bunyavirales     Rhizoctonia cerealis bunyavirus
28024850 28024850 PRJNA520845_P_NODE_10745_length_1195_cov_2.755793_g8747_i1 PRJNA520845 10745 1195 2.755793 32.93172635 brine shrimp arlivirus 8 2900383 Viruses Viruses 397 5.929999999999999e-133   NR UNI74120.1 2900383 g8747 i1 52.6 0.901255230125523 359 170 90.1 0 46 1122 1 359 UNI74120.1 MAG: hypothetical protein [brine shrimp arlivirus 8] diamond 1077 397 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Lispiviridae Artemvirus Artemvirus bsaeighalis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;