RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA520845" and tax_phylum = "Candidatus Margulisiibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Margulisiibacteriota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA520845 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27772485 27772485 PRJNA520845_P_NODE_251304_length_244_cov_0.900585_g249805_i0 PRJNA520845 251304 244 0.900585 2.1974274 Candidatus Marinamargulisbacteria bacterium 2933166 Bacteria Bacteria 40 0.0412   NR MDA8575970.1 2933166 g249805 i0 64.3 0.344262295081967 28 10 34.4 0 242 159 7 34 MDA8575970.1 DUF4116 domain-containing protein [Candidatus Marinamargulisbacteria bacterium] diamond 84 40 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Margulisiibacteriota Candidatus Marinamargulisbacteria       Candidatus Marinamargulisbacteria bacterium
31277874 31277874 PRJNA520845_P_NODE_188415_length_271_cov_1.303030_g186916_i0 PRJNA520845 188415 271 1.30303 3.5312113 Candidatus Margulisiibacteriota bacterium 2053573 Bacteria Bacteria 51.2 5.44e-5   NR MBU0581296.1 2053573 g186916 i0 55.3 2.02583025830258 47 21 52 0 7 147 39 85 MBU0581296.1 ankyrin repeat domain-containing protein [Candidatus Margulisiibacteriota bacterium] diamond 549 51.2 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Margulisiibacteriota         Candidatus Margulisiibacteriota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;