RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA520845" and tax_kingdom = "Pararnavirae"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Pararnavirae · 3 ✖

bioproject 1

  • PRJNA520845 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26728657 26728657 PRJNA520845_P_NODE_215141_length_251_cov_0.865169_g213642_i0 PRJNA520845 215141 251 0.865169 2.17157419 Paper mulberry vein-banding virus 2810460 Viruses Viruses 97.4 2.42e-21   NR QRN45547.1 2810460 g213642 i0 66.3 0.956175298804781 80 25 95.6 2 245 6 503 580 QRN45547.1 P3 [Paper mulberry vein-banding virus] diamond 240 97.4 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Caulimoviridae Badnavirus Paper mulberry vein-banding virus
28119503 28119503 PRJNA520845_P_NODE_216645_length_251_cov_0.865169_g215146_i0 PRJNA520845 216645 251 0.865169 2.17157419 Paper mulberry vein-banding virus 2810460 Viruses Viruses 161 9.46e-44   NR QRN45547.1 2810460 g215146 i0 89.2 0.99203187250996006 83 9 99.2 0 249 1 204 286 QRN45547.1 P3 [Paper mulberry vein-banding virus] diamond 249 161 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Caulimoviridae Badnavirus Paper mulberry vein-banding virus
28466967 28466967 PRJNA520845_P_NODE_169466_length_286_cov_1.309859_g167967_i0 PRJNA520845 169466 286 1.309859 3.74619674 Retroviridae sp. 2681591 Viruses Viruses 62.4 7.38e-9   NR XNT20556.1 2681591 g167967 i0 43.9 0.86013986013986 82 45 85 1 284 42 449 530 XNT20556.1 MAG: hypothetical protein, partial [Retroviridae sp.] diamond 246 62.4 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae   Retroviridae sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;