RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA520845" and tax_clade = "Pithoviruses"

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tax_superkingdom 1

tax_clade 1

  • Pithoviruses · 2 ✖

bioproject 1

  • PRJNA520845 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_phylum 0

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
491941 491941 PRJNA520845_P_NODE_40001_length_597_cov_1.332061_g38528_i0 PRJNA520845 40001 597 1.332061 7.95240417 Solumvirus sp. 2487773 Viruses Viruses 177 1.9799999999999994e-52   NR AYV86227.1 2487773 g38528 i0 58.8 0.768844221105528 153 62 76.9 1 537 79 42 193 AYV86227.1 MAG: hypothetical protein Solumvirus2_34 [Solumvirus sp.] diamond 459 177 1 Viruses Pithoviruses             Solumvirus sp.
30645716 30645716 PRJNA520845_P_NODE_116013_length_346_cov_1.128205_g114514_i0 PRJNA520845 116013 346 1.128205 3.9035893 Pithovirus LCPAC2 2506592 Viruses Viruses 57 3.32e-7   NR QBK91324.1 2506592 g114514 i0 31.7 1.76011560693642 120 71 94.5 3 17 343 46 165 QBK91324.1 MAG: Ras family GTPase [Pithovirus LCPAC202] diamond 609 57 1 Viruses Pithoviruses             Pithovirus LCPAC202

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;