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contig_metadata

13 rows where analysis = "diamond", bioproject = "PRJNA515078" and tax_phylum = "Perkinsozoa"

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tax_superkingdom 1

tax_phylum 1

  • Perkinsozoa · 13 ✖

tax_clade 1

bioproject 1

  • PRJNA515078 · 13 ✖

analysis 1

  • diamond · 13 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
486849 486849 PRJNA515078_P_NODE_28721_length_163_cov_0.928571_g28488_i0 PRJNA515078 28721 163 0.928571 1.51357073 Perkinsus chesapeaki 330153 SAR_Eukaryotes SAR_Eukaryotes 82 1.8e-16   NR KAF4677828.1 330153 g28488 i0 73.5 5.41104294478528 49 13 90.2 0 160 14 842 890 KAF4677828.1 H(+)-transporting V0 sector ATPase subunit a [Perkinsus chesapeaki] diamond 882 82 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus chesapeaki
10690717 10690717 PRJNA515078_P_NODE_4889_length_431_cov_2.017766_g4656_i0 PRJNA515078 4889 431 2.017766 8.69657146 Perkinsus chesapeaki 330153 SAR_Eukaryotes SAR_Eukaryotes 176 7.01e-50   NR KAF4677256.1 330153 g4656 i0 69.6 0.80046403712297 115 29 80 1 430 86 362 470 KAF4677256.1 Cytosolic seryl-tRNA synthetase [Perkinsus chesapeaki] diamond 345 176 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus chesapeaki
26649234 26649234 PRJNA515078_P_NODE_28241_length_164_cov_1.228346_g28008_i0 PRJNA515078 28241 164 1.228346 2.01448744 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 87.4 1.9e-20   NR KAF4754071.1 32597 g28008 i0 74.1 63.219512195122 54 14 98.8 0 2 163 5 58 KAF4754071.1 Ras- protein Rab-2A, partial [Perkinsus olseni] diamond 10368 88.2 0.99092970521542 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus olseni
26728561 26728561 PRJNA515078_P_NODE_2121_length_668_cov_10.026941_g1923_i0 PRJNA515078 2121 668 10.026941 66.97996588 Perkinsus marinus ATCC 5 31276 SAR_Eukaryotes SAR_Eukaryotes 239 1.39e-76   NR XP_002778466.1 423536 g1923 i0 63.4 0.835329341317365 186 67 83.1 1 27 581 6 191 XP_002778466.1 cyclophilin, putative [Perkinsus marinus ATCC 50983] diamond 558 239 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus marinus
27976909 27976909 PRJNA515078_P_NODE_29625_length_160_cov_1.902439_g29392_i0 PRJNA515078 29625 160 1.902439 3.0439024 Dinophyceae 2864 SAR_Eukaryotes SAR_Eukaryotes 56.6 6.72e-9   NR KAF4650015.1 330153 g29392 i0 54.3 4.81875 46 20 84.4 1 26 160 25 70 KAF4650015.1 DNA-directed RNA polymerase core subunit rpc10 [Perkinsus chesapeaki] diamond 771 56.6 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus chesapeaki
30139977 30139977 PRJNA515078_P_NODE_1772_length_730_cov_1.975469_g1594_i0 PRJNA515078 1772 730 1.975469 14.4209237 Perkinsus marinus ATCC 5 31276 SAR_Eukaryotes SAR_Eukaryotes 250 1.19e-80   NR XP_002778466.1 423536 g1594 i0 64.1 0.789041095890411 192 63 78.5 2 37 609 6 192 XP_002778466.1 cyclophilin, putative [Perkinsus marinus ATCC 50983] diamond 576 250 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus marinus
30155482 30155482 PRJNA515078_P_NODE_28832_length_162_cov_1.864000_g28599_i0 PRJNA515078 28832 162 1.864 3.01968 root 1 Root_unresolved Root_unresolved 50.4 2.34e-5   NR KAF4659790.1 330153 g28599 i0 51 2.72222222222222 49 23 90.7 1 2 148 2012 2059 KAF4659790.1 chromosome X 22 [Perkinsus chesapeaki] diamond 441 50.8 0.992125984251969 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus chesapeaki
30250784 30250784 PRJNA515078_P_NODE_24812_length_174_cov_1.708029_g24579_i0 PRJNA515078 24812 174 1.708029 2.97197046 Perkinsus 28000 SAR_Eukaryotes SAR_Eukaryotes 75.5 2.59e-14   NR KAF4751618.1 32597 g24579 i0 61.8 4.74137931034483 55 20 93.1 1 174 13 41 95 KAF4751618.1 E2-like enzyme [Perkinsus olseni] diamond 825 75.5 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus olseni
31483298 31483298 PRJNA515078_P_NODE_4616_length_447_cov_1.580488_g4384_i0 PRJNA515078 4616 447 1.580488 7.06478136 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 230 1.1e-66   NR KAF4661621.1 32597 g4384 i0 78.1 21.7852348993289 146 32 98 0 445 8 1960 2105 KAF4661621.1 hypothetical protein FOZ61_003069 [Perkinsus olseni] diamond 9738 230 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus olseni
31483299 31483299 PRJNA515078_P_NODE_716_length_1123_cov_5.098527_g619_i0 PRJNA515078 716 1123 5.098527 57.25645821 root 1 Root_unresolved Root_unresolved 311 3.01e-98   NR KAF4671711.1 330153 g619 i0 57.6 4.34372217275156 271 115 72.4 0 985 173 209 479 KAF4671711.1 hypothetical protein FOL47_001318 [Perkinsus chesapeaki] diamond 4878 313 0.993610223642173 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus chesapeaki
31594407 31594407 PRJNA515078_P_NODE_3256_length_538_cov_2.157685_g3028_i0 PRJNA515078 3256 538 2.157685 11.6083453 Perkinsus olseni 32597 SAR_Eukaryotes SAR_Eukaryotes 50.8 0.00103   NR KAF4695550.1 32597 g3028 i0 31.7 1.47211895910781 120 76 65.2 2 370 20 727 843 KAF4695550.1 hypothetical protein FOZ60_004046, partial [Perkinsus olseni] diamond 792 50.8 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus olseni
31657251 31657251 PRJNA515078_P_NODE_28657_length_163_cov_1.238095_g28424_i0 PRJNA515078 28657 163 1.238095 2.01809485 Perkinsus marinus ATCC 5 31276 SAR_Eukaryotes SAR_Eukaryotes 42.4 0.0169   NR XP_002774997.1 423536 g28424 i0 35.2 0.993865030674847 54 32 93.9 1 156 4 53 106 XP_002774997.1 tubulin-specific chaperone B, putative [Perkinsus marinus ATCC 50983] diamond 162 42.4 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus marinus
32322156 32322156 PRJNA515078_P_NODE_7159_length_348_cov_2.257235_g6926_i0 PRJNA515078 7159 348 2.257235 7.8551778 Perkinsus marinus ATCC 5 31276 SAR_Eukaryotes SAR_Eukaryotes 51.2 7.46e-5   NR XP_002765612.1 423536 g6926 i0 55.1 0.75 49 21 42.2 1 326 180 1 48 XP_002765612.1 conserved hypothetical protein [Perkinsus marinus ATCC 50983] diamond 261 51.2 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus marinus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;