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contig_metadata

21 rows where analysis = "diamond", bioproject = "PRJNA515078" and tax_phylum = "Chloroflexota"

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tax_superkingdom 1

tax_phylum 1

  • Chloroflexota · 21 ✖

tax_kingdom 1

bioproject 1

  • PRJNA515078 · 21 ✖

analysis 1

  • diamond · 21 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
12589920 12589920 PRJNA515078_P_NODE_32450_length_154_cov_1.461538_g32217_i0 PRJNA515078 32450 154 1.461538 2.25076852 FCB group 1783270 Bacteria Bacteria 84.3 2.43e-17   NR MDD5082062.1 2026733 g32217 i0 86.3 37.7532467532468 51 7 99.4 0 154 2 152 202 MDD5082062.1 molecular chaperone DnaK [Dehalococcoidales bacterium] diamond 5814 85.1 0.990599294947121 Bacteria   Bacillati Chloroflexota Dehalococcoidia Dehalococcoidales     Dehalococcoidales bacterium
22787973 22787973 PRJNA515078_P_NODE_14258_length_233_cov_1.545918_g14025_i0 PRJNA515078 14258 233 1.545918 3.60198894 Ktedonobacterales bacterium 2306968 Bacteria Bacteria 93.6 2.8e-20   NR HEX6818152.1 2306968 g14025 i0 64.9 2.97424892703863 77 20 99.1 1 232 2 168 237 HEX6818152.1 GTPase ObgE [Ktedonobacterales bacterium] diamond 693 93.6 1 Bacteria   Bacillati Chloroflexota Ktedonobacteria Ktedonobacterales     Ktedonobacterales bacterium
26950493 26950493 PRJNA515078_P_NODE_9282_length_299_cov_2.076336_g9049_i0 PRJNA515078 9282 299 2.076336 6.20824464 Chloroflexaceae bacterium 2562117 Bacteria Bacteria 57.8 3.65e-7   NR NJP04782.1 2562117 g9049 i0 67.6 1.62541806020067 37 12 37.1 0 297 187 430 466 NJP04782.1 deoxyribodipyrimidine photo-lyase [Chloroflexaceae bacterium] diamond 486 57.8 1 Bacteria   Bacillati Chloroflexota Chloroflexia Chloroflexales Chloroflexaceae   Chloroflexaceae bacterium
27803857 27803857 PRJNA515078_P_NODE_26024_length_170_cov_2.052632_g25791_i0 PRJNA515078 26024 170 2.052632 3.4894744 Caldilineaceae bacterium 2614250 Bacteria Bacteria 52.4 3.34e-6   NR MBW7881338.1 2614250 g25791 i0 76.5 2.18823529411765 34 7 60 1 68 169 158 190 MBW7881338.1 pyridoxal 5'-phosphate synthase glutaminase subunit PdxT [Caldilineaceae bacterium] diamond 372 52.4 1 Bacteria   Bacillati Chloroflexota Caldilineae Caldilineales Caldilineaceae   Caldilineaceae bacterium
28308986 28308986 PRJNA515078_P_NODE_34346_length_150_cov_1.725664_g34113_i0 PRJNA515078 34346 150 1.725664 2.588496 Anaerolineae bacterium 2052143 Bacteria Bacteria 60.5 4.93e-9   NR MBG7609968.1 2052143 g34113 i0 65.3 3.92 49 17 98 0 3 149 207 255 MBG7609968.1 hypothetical protein [Anaerolineae bacterium] diamond 588 60.5 1 Bacteria   Bacillati Chloroflexota Anaerolineae       Anaerolineae bacterium
28545533 28545533 PRJNA515078_P_NODE_14187_length_234_cov_1.187817_g13954_i0 PRJNA515078 14187 234 1.187817 2.77949178 PVC group 1783257 Bacteria Bacteria 53.9 3.98e-6   NR MFC1973516.1 2026724 g13954 i0 41.4 2.61538461538462 70 37 88.5 2 228 22 1076 1142 MFC1973516.1 PKD domain-containing protein [Chloroflexota bacterium] diamond 612 54.3 0.992633517495396 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
28640216 28640216 PRJNA515078_P_NODE_25627_length_172_cov_1.118519_g25394_i0 PRJNA515078 25627 172 1.118519 1.92385268 Chloroflexota 200795 Bacteria Bacteria 50.8 1.05e-5   NR MFQ5617136.1 2073117 g25394 i0 51 3.48837209302326 49 24 85.5 0 155 9 25 73 MFQ5617136.1 rhomboid family intramembrane serine protease [Anaerolineales bacterium] diamond 600 50.8 1 Bacteria   Bacillati Chloroflexota Anaerolineae Anaerolineales     Anaerolineales bacterium
28734781 28734781 PRJNA515078_P_NODE_25707_length_171_cov_1.888060_g25474_i0 PRJNA515078 25707 171 1.88806 3.2285826 root 1 Root_unresolved Root_unresolved 57.4 8.17e-8   NR MFL2746032.1 2026734 g25474 i0 46.3 7.68421052631579 54 28 93 1 11 169 162 215 MFL2746032.1 PQQ-dependent sugar dehydrogenase [Dehalococcoidia bacterium] diamond 1314 57.8 0.993079584775087 Bacteria   Bacillati Chloroflexota Dehalococcoidia       Dehalococcoidia bacterium
29319213 29319213 PRJNA515078_P_NODE_21049_length_189_cov_1.335526_g20816_i0 PRJNA515078 21049 189 1.335526 2.52414414 Anaerolineales bacterium 2073117 Bacteria Bacteria 52.4 7.03e-6   NR MFO8035657.1 2073117 g20816 i0 35 4.85714285714286 60 39 95.2 0 184 5 272 331 MFO8035657.1 serpin family protein [Anaerolineales bacterium] diamond 918 52.4 1 Bacteria   Bacillati Chloroflexota Anaerolineae Anaerolineales     Anaerolineales bacterium
30171894 30171894 PRJNA515078_P_NODE_29072_length_162_cov_1.040000_g28839_i0 PRJNA515078 29072 162 1.04 1.6848 Dehalococcoidales bacterium 2026733 Bacteria Bacteria 77.4 2.22e-16   NR MDO9333994.1 2026733 g28839 i0 90.9 0.814814814814815 44 3 79.6 1 1 129 92 135 MDO9333994.1 30S ribosomal protein S4 [Dehalococcoidales bacterium] diamond 132 77.4 1 Bacteria   Bacillati Chloroflexota Dehalococcoidia Dehalococcoidales     Dehalococcoidales bacterium
30566181 30566181 PRJNA515078_P_NODE_22733_length_182_cov_1.344828_g22500_i0 PRJNA515078 22733 182 1.344828 2.44758696 Bacillati 1783272 Bacteria Bacteria 53.9 1.87e-6   NR WP_287906347.1 1904827 g22500 i0 45.8 11.8846153846154 59 32 97.3 0 4 180 335 393 WP_287906347.1 RCC1 repeat-containing protein [Chloroflexus sp.] diamond 2163 54.3 0.992633517495396 Bacteria   Bacillati Chloroflexota Chloroflexia Chloroflexales Chloroflexaceae Chloroflexus Chloroflexus sp.
30930263 30930263 PRJNA515078_P_NODE_24014_length_177_cov_1.392857_g23781_i0 PRJNA515078 24014 177 1.392857 2.46535689 Chloroflexota bacterium 2026724 Bacteria Bacteria 43.5 0.00809   NR MFL5769623.1 2026724 g23781 i0 40.4 3.22033898305085 52 25 88.1 1 157 2 122 167 MFL5769623.1 PQQ-dependent sugar dehydrogenase [Chloroflexota bacterium] diamond 570 43.5 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
31088233 31088233 PRJNA515078_P_NODE_31415_length_156_cov_1.966387_g31182_i0 PRJNA515078 31415 156 1.966387 3.06756372 Chloroflexota bacterium 2026724 Bacteria Bacteria 50.1 2.89e-5   NR MEA3309843.1 2026724 g31182 i0 44.7 4.61538461538461 47 26 90.4 0 2 142 251 297 MEA3309843.1 serpin family protein [Chloroflexota bacterium] diamond 720 50.1 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
31246238 31246238 PRJNA515078_P_NODE_18695_length_201_cov_1.048780_g18462_i0 PRJNA515078 18695 201 1.04878 2.1080478 Candidatus Thermofonsia Clade 1 bacterium 2364210 Bacteria Bacteria 53.9 2.35e-6   NR PJF37383.1 2364210 g18462 i0 46.9 2.19402985074627 49 26 73.1 0 194 48 10 58 PJF37383.1 MAG: acyl-CoA dehydrogenase [Candidatus Thermofonsia Clade 1 bacterium] diamond 441 53.9 1 Bacteria Candidatus Thermofonsia Clade 1 Bacillati Chloroflexota Candidatus Thermofontia       Candidatus Thermofonsia Clade 1 bacterium
31309421 31309421 PRJNA515078_P_NODE_14835_length_228_cov_1.303665_g14602_i0 PRJNA515078 14835 228 1.303665 2.9723562 Chloroflexia bacterium 2448782 Bacteria Bacteria 66.2 1.6e-10   NR HEX2910365.1 2448782 g14602 i0 51.9 5.77631578947368 54 26 71.1 0 223 62 1265 1318 HEX2910365.1 6-bladed beta-propeller [Chloroflexia bacterium] diamond 1317 66.2 1 Bacteria   Bacillati Chloroflexota Chloroflexia       Chloroflexia bacterium
31657235 31657235 PRJNA515078_P_NODE_14597_length_230_cov_1.378238_g14364_i0 PRJNA515078 14597 230 1.378238 3.1699474 Chloroflexota bacterium 2026724 Bacteria Bacteria 42.4 0.0406   NR HLJ67436.1 2026724 g14364 i0 25 0.834782608695652 64 46 80.9 1 45 230 213 276 HLJ67436.1 carbohydrate ABC transporter permease [Chloroflexota bacterium] diamond 192 42.4 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
31720681 31720681 PRJNA515078_P_NODE_15657_length_221_cov_1.570652_g15424_i0 PRJNA515078 15657 221 1.570652 3.47114092 Anaerolineales bacterium 2073117 Bacteria Bacteria 99.8 1.12e-24   NR MBL8094096.1 2073117 g15424 i0 66.1 3.40723981900452 62 21 84.2 0 6 191 88 149 MBL8094096.1 nucleoside-diphosphate kinase [Anaerolineales bacterium] diamond 753 99.8 1 Bacteria   Bacillati Chloroflexota Anaerolineae Anaerolineales     Anaerolineales bacterium
31878680 31878680 PRJNA515078_P_NODE_25017_length_174_cov_1.029197_g24784_i0 PRJNA515078 25017 174 1.029197 1.79080278 Anaerolineales bacterium 2073117 Bacteria Bacteria 44.3 0.00441   NR MBE7556839.1 2073117 g24784 i0 52.2 1.74137931034483 46 22 79.3 0 28 165 1167 1212 MBE7556839.1 PKD domain-containing protein [Anaerolineales bacterium] diamond 303 44.3 1 Bacteria   Bacillati Chloroflexota Anaerolineae Anaerolineales     Anaerolineales bacterium
32416858 32416858 PRJNA515078_P_NODE_13959_length_236_cov_1.763819_g13726_i0 PRJNA515078 13959 236 1.763819 4.16261284 Chloroflexota bacterium 2026724 Bacteria Bacteria 43.9 0.0131   NR MYC30865.1 2026724 g13726 i0 32.4 0.864406779661017 68 46 86.4 0 5 208 38 105 MYC30865.1 CoA transferase [Chloroflexota bacterium] diamond 204 43.9 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
32621702 32621702 PRJNA515078_P_NODE_26100_length_170_cov_1.466165_g25867_i0 PRJNA515078 26100 170 1.466165 2.4924805 Chloroflexus 1107 Bacteria Bacteria 55.1 6.18e-7   NR WP_299756274.1 214040 g25867 i0 56.3 1.69411764705882 48 21 84.7 0 23 166 48 95 WP_299756274.1 SdrD B-like domain-containing protein, partial [uncultured Chloroflexus sp.] diamond 288 55.5 0.992792792792793 Bacteria   Bacillati Chloroflexota Chloroflexia Chloroflexales Chloroflexaceae Chloroflexus uncultured Chloroflexus sp.
32700718 32700718 PRJNA515078_P_NODE_9600_length_293_cov_1.828125_g9367_i0 PRJNA515078 9600 293 1.828125 5.35640625 Dehalococcoidia bacterium 2026734 Bacteria Bacteria 68.2 7.47e-11   NR MFQ5872256.1 2026734 g9367 i0 42.7 0.982935153583618 96 52 96.2 2 1 282 83 177 MFQ5872256.1 GDP-mannose 4,6-dehydratase [Dehalococcoidia bacterium] diamond 288 68.2 1 Bacteria   Bacillati Chloroflexota Dehalococcoidia       Dehalococcoidia bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;