RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA513467" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 2 ✖

tax_phylum 1

tax_kingdom 1

bioproject 1

  • PRJNA513467 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29193120 29193120 PRJNA513467_S_NODE_1369_length_292_cov_2.086275_g1346_i0 PRJNA513467 1369 292 2.086275 6.091923 Caudoviricetes sp. 2832643 Viruses Viruses 40.4 0.0365   NR XOS44195.1 2832643 g1346 i0 54.5 0.339041095890411 33 13 33.9 1 109 207 8 38 XOS44195.1 MAG: hypothetical protein MSP0939_64 [Caudoviricetes sp.] diamond 99 40.4 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
29713138 29713138 PRJNA513467_S_NODE_6410_length_165_cov_2.742188_g6387_i0 PRJNA513467 6410 165 2.742188 4.5246102 Gamaleyavirus 1920753 Viruses Viruses 48.9 8.58e-5   NR DAE39455.1 38018 g6387 i0 51 3.81818181818182 51 25 92.7 0 164 12 122 172 DAE39455.1 MAG TPA: RNA polymerase [Bacteriophage sp.] diamond 630 48.9 1 Viruses               Bacteriophage sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;