RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA513467" and tax_kingdom = "Thermoproteati"

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tax_superkingdom 1

tax_kingdom 1

  • Thermoproteati · 2 ✖

bioproject 1

  • PRJNA513467 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28972016 28972016 PRJNA513467_S_NODE_4208_length_192_cov_1.987097_g4185_i0 PRJNA513467 4208 192 1.987097 3.81522624 Nitrososphaeraceae archaeon 2169593 Archaea Archaea 62.8 1.59e-9   NR HEX5185741.1 2169593 g4185 i0 71.1 1.6875 38 11 59.4 0 116 3 173 210 HEX5185741.1 hypothetical protein [Nitrososphaeraceae archaeon] diamond 324 62.8 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae   Nitrososphaeraceae archaeon
31246222 31246222 PRJNA513467_S_NODE_2995_length_217_cov_1.300000_g2972_i0 PRJNA513467 2995 217 1.3 2.821 Candidatus Bathyarchaeota archaeon 2026714 Archaea Archaea 56.6 8.38e-8   NR RLI51660.1 2026714 g2972 i0 43.1 0.898617511520737 65 37 89.9 0 214 20 81 145 RLI51660.1 MAG: hypothetical protein DRO61_01860 [Candidatus Bathyarchaeota archaeon] diamond 195 56.6 1 Archaea   Thermoproteati Candidatus Bathyarchaeota         Candidatus Bathyarchaeota archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;