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contig_metadata

11 rows where analysis = "diamond", bioproject = "PRJNA513467" and tax_clade = "FCB group"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • FCB group · 11 ✖

bioproject 1

  • PRJNA513467 · 11 ✖

analysis 1

  • diamond · 11 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26792420 26792420 PRJNA513467_S_NODE_781_length_367_cov_1.730303_g758_i0 PRJNA513467 781 367 1.730303 6.35021201 Sphingobacterium allocomposti 415956 Bacteria Bacteria 192 1.44e-59   NR WP_148907411.1 415956 g758 i0 100 0.768392370572207 94 0 76.8 0 3 284 101 194 WP_148907411.1 DUF4290 domain-containing protein [Sphingobacterium allocomposti] diamond 282 192 1 Bacteria FCB group Pseudomonadati Bacteroidota Sphingobacteriia Sphingobacteriales Sphingobacteriaceae Sphingobacterium Sphingobacterium allocomposti
27503548 27503548 PRJNA513467_S_NODE_7303_length_158_cov_1.190083_g7280_i0 PRJNA513467 7303 158 1.190083 1.88033114 Pseudomonadati 3379134 Bacteria Bacteria 71.2 1.02e-12   NR WP_277479552.1 1075417 g7280 i0 64.3 7.84177215189873 42 15 79.7 0 156 31 455 496 WP_277479552.1 FAD-dependent oxidoreductase [Catalinimonas alkaloidigena] diamond 1239 71.2 1 Bacteria FCB group Pseudomonadati Bacteroidota Cytophagia Cytophagales Catalimonadaceae Catalinimonas Catalinimonas alkaloidigena
27709428 27709428 PRJNA513467_S_NODE_1964_length_254_cov_3.133641_g1941_i0 PRJNA513467 1964 254 3.133641 7.95944814 Cyclobacteriaceae bacterium 2099675 Bacteria Bacteria 138 1.65e-36   NR HQQ97914.1 2099675 g1941 i0 77.4 1.98425196850394 84 19 99.2 0 252 1 212 295 HQQ97914.1 polysaccharide biosynthesis C-terminal domain-containing protein [Cyclobacteriaceae bacterium] diamond 504 138 1 Bacteria FCB group Pseudomonadati Bacteroidota Cytophagia Cytophagales Cyclobacteriaceae   Cyclobacteriaceae bacterium
27835124 27835124 PRJNA513467_S_NODE_4464_length_188_cov_1.655629_g4441_i0 PRJNA513467 4464 188 1.655629 3.11258252 Chitinophagales bacterium 2448779 Bacteria Bacteria 56.6 1.85e-7   NR MBL7788765.1 2448779 g4441 i0 57.8 0.718085106382979 45 19 71.8 0 186 52 179 223 MBL7788765.1 tetratricopeptide repeat protein [Chitinophagales bacterium] diamond 135 56.6 1 Bacteria FCB group Pseudomonadati Bacteroidota Chitinophagia Chitinophagales     Chitinophagales bacterium
28229314 28229314 PRJNA513467_S_NODE_5206_length_178_cov_1.659574_g5183_i0 PRJNA513467 5206 178 1.659574 2.95404172 Paludibacter 346096 Bacteria Bacteria 86.3 9.86e-20   NR MEI6556078.1 1898105 g5183 i0 86 2.8988764044943802 43 6 72.5 0 130 2 1 43 MEI6556078.1 hypothetical protein [Paludibacter sp.] diamond 516 86.3 1 Bacteria FCB group Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Paludibacteraceae Paludibacter Paludibacter sp.
28403597 28403597 PRJNA513467_S_NODE_4146_length_193_cov_1.500000_g4123_i0 PRJNA513467 4146 193 1.5 2.895 Sphingobacterium allocomposti 415956 Bacteria Bacteria 57.8 8.82e-8   NR WP_148909915.1 415956 g4123 i0 100 0.450777202072539 29 0 45.1 0 191 105 325 353 WP_148909915.1 Mrp/NBP35 family ATP-binding protein [Sphingobacterium allocomposti] diamond 87 57.8 1 Bacteria FCB group Pseudomonadati Bacteroidota Sphingobacteriia Sphingobacteriales Sphingobacteriaceae Sphingobacterium Sphingobacterium allocomposti
29255872 29255872 PRJNA513467_S_NODE_2049_length_250_cov_2.774648_g2026_i0 PRJNA513467 2049 250 2.774648 6.93662 Chryseobacterium sp. VAUSW3 2010998 Bacteria Bacteria 165 2.9199999999999998e-46   NR OWR14901.1 2010998 g2026 i0 96.3 0.984 82 3 98.4 0 3 248 60 141 OWR14901.1 hypothetical protein CDW55_00205 [Chryseobacterium sp. VAUSW3] diamond 246 165 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Weeksellaceae Chryseobacterium Chryseobacterium sp. VAUSW3
29776567 29776567 PRJNA513467_S_NODE_5531_length_174_cov_2.145985_g5508_i0 PRJNA513467 5531 174 2.145985 3.7340139 Prevotella 838 Bacteria Bacteria 113 4.239999999999999e-31   NR MBO5314386.1 59823 g5508 i0 96.6 2 58 2 100 0 174 1 14 71 MBO5314386.1 50S ribosomal protein L23 [Prevotella sp.] diamond 348 113 1 Bacteria FCB group Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Prevotella Prevotella sp.
29856028 29856028 PRJNA513467_S_NODE_4851_length_183_cov_1.267123_g4828_i0 PRJNA513467 4851 183 1.267123 2.31883509 Sphingobacterium allocomposti 415956 Bacteria Bacteria 126 5.559999999999999e-32   NR WP_148910241.1 415956 g4828 i0 100 1 61 0 100 0 1 183 154 214 WP_148910241.1 KUP/HAK/KT family potassium transporter [Sphingobacterium allocomposti] diamond 183 126 1 Bacteria FCB group Pseudomonadati Bacteroidota Sphingobacteriia Sphingobacteriales Sphingobacteriaceae Sphingobacterium Sphingobacterium allocomposti
30550974 30550974 PRJNA513467_S_NODE_7173_length_159_cov_1.139344_g7150_i0 PRJNA513467 7173 159 1.139344 1.81155696 Bacteroidota bacterium 1898104 Bacteria Bacteria 42.4 0.0171   NR MES2382405.1 1898104 g7150 i0 47.8 0.867924528301887 46 24 86.8 0 22 159 243 288 MES2382405.1 hypothetical protein [Bacteroidota bacterium] diamond 138 42.4 1 Bacteria FCB group Pseudomonadati Bacteroidota         Bacteroidota bacterium
32669266 32669266 PRJNA513467_S_NODE_8380_length_150_cov_2.212389_g8357_i0 PRJNA513467 8380 150 2.212389 3.3185835 Sphingobacteriia bacterium 2035813 Bacteria Bacteria 75.1 2.44e-14   NR MCE1167990.1 2035813 g8357 i0 72.9 0.96 48 13 96 0 149 6 269 316 MCE1167990.1 nucleotidyl transferase AbiEii/AbiGii toxin family protein [Sphingobacteriia bacterium] diamond 144 75.1 1 Bacteria FCB group Pseudomonadati Bacteroidota Sphingobacteriia       Sphingobacteriia bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;