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contig_metadata

22 rows where analysis = "diamond", bioproject = "PRJNA513467" and tax_clade = "Bacteria candidate phyla"

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tax_superkingdom 1

tax_clade 1

  • Bacteria candidate phyla · 22 ✖

bioproject 1

  • PRJNA513467 · 22 ✖

analysis 1

  • diamond · 22 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26617732 26617732 PRJNA513467_S_NODE_1421_length_288_cov_3.661355_g1398_i0 PRJNA513467 1421 288 3.661355 10.5447024 Bacteria 2 Bacteria Bacteria 152 3.759999999999999e-42   NR KKP72965.1 1618740 g1398 i0 86.5 3.70833333333333 89 12 92.7 0 20 286 25 113 KKP72965.1 MAG: Ribonucleoside-triphosphate reductase, partial [Candidatus Nomurabacteria bacterium GW2011_GWB1_35_20] diamond 1068 152 1 Bacteria Bacteria candidate phyla   Candidatus Nomuraibacteriota         Candidatus Nomurabacteria bacterium GW2011_GWB1_35_20
27235179 27235179 PRJNA513467_S_NODE_1763_length_265_cov_1.539474_g1740_i0 PRJNA513467 1763 265 1.539474 4.0796061 Minisyncoccota bacterium 2053589 Bacteria Bacteria 150 1.13e-42   NR MEX0598106.1 2053589 g1740 i0 76.8 1.07547169811321 95 15 99.6 1 265 2 44 138 MEX0598106.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 285 150 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
27425055 27425055 PRJNA513467_S_NODE_5303_length_177_cov_1.671429_g5280_i0 PRJNA513467 5303 177 1.671429 2.95842933 Minisyncoccota bacterium 2053589 Bacteria Bacteria 92 6.53e-20   NR HEY4505456.1 2053589 g5280 i0 84.7 5.93220338983051 59 9 100 0 177 1 131 189 HEY4505456.1 lipid II flippase MurJ [Candidatus Paceibacterota bacterium] diamond 1050 92 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
27614415 27614415 PRJNA513467_S_NODE_2304_length_239_cov_1.252475_g2281_i0 PRJNA513467 2304 239 1.252475 2.99341525 Microgenomates group bacterium GW2 2461418 Bacteria Bacteria 106 2.07e-26   NR KKU25464.1 1618501 g2281 i0 71.4 0.878661087866109 70 20 87.9 0 3 212 157 226 KKU25464.1 MAG: methylase N-4/N-6 domain protein [Microgenomates group bacterium GW2011_GWA2_46_16] diamond 210 106 1 Bacteria Bacteria candidate phyla             Microgenomates group bacterium GW2011_GWA2_46_16
27677701 27677701 PRJNA513467_S_NODE_5524_length_174_cov_2.291971_g5501_i0 PRJNA513467 5524 174 2.291971 3.98802954 Candidatus Tayloriibacteriota bacterium 2052153 Bacteria Bacteria 96.7 5.62e-23   NR MDP3697774.1 2052153 g5501 i0 79.6 0.931034482758621 54 11 93.1 0 3 164 39 92 MDP3697774.1 DedA family protein [Candidatus Taylorbacteria bacterium] diamond 162 96.7 1 Bacteria Bacteria candidate phyla   Candidatus Tayloriibacteriota         Candidatus Tayloriibacteriota bacterium
27961552 27961552 PRJNA513467_S_NODE_1885_length_258_cov_3.212670_g1862_i0 PRJNA513467 1885 258 3.21267 8.2886886 Candidatus Magasanikiibacteriota bacterium 2026717 Bacteria Bacteria 149 1.34e-41   NR MBI2037977.1 2026717 g1862 i0 81.4 4 86 16 100 0 1 258 55 140 MBI2037977.1 rod shape-determining protein RodA [Candidatus Magasanikiibacteriota bacterium] diamond 1032 149 1 Bacteria Bacteria candidate phyla   Candidatus Magasanikiibacteriota         Candidatus Magasanikiibacteriota bacterium
28340442 28340442 PRJNA513467_S_NODE_7846_length_154_cov_1.333333_g7823_i0 PRJNA513467 7846 154 1.333333 2.05333282 Candidatus Berkelbacteria bacterium 2053521 Bacteria Bacteria 99.8 9.43e-23   NR MDH4358797.1 2053521 g7823 i0 88.2 1.96753246753247 51 6 99.4 0 2 154 227 277 MDH4358797.1 valine--tRNA ligase [Candidatus Berkelbacteria bacterium] diamond 303 99.8 1 Bacteria Bacteria candidate phyla   Candidatus Berkelbacteria         Candidatus Berkelbacteria bacterium
29019200 29019200 PRJNA513467_S_NODE_2588_length_228_cov_2.612565_g2565_i0 PRJNA513467 2588 228 2.612565 5.9566482 Bacteria 2 Bacteria Bacteria 87 7.46e-18   NR KKS96225.1 1618521 g2565 i0 70.8 1.89473684210526 72 20 94.7 1 227 12 210 280 KKS96225.1 MAG: hypothetical protein UV71_C0001G0099 [Microgenomates group bacterium GW2011_GWC1_43_13] diamond 432 87 1 Bacteria Bacteria candidate phyla             Microgenomates group bacterium GW2011_GWC1_43_13
29161618 29161618 PRJNA513467_S_NODE_5969_length_170_cov_1.052632_g5946_i0 PRJNA513467 5969 170 1.052632 1.7894744 Candidatus Levyibacteriota bacterium 2052151 Bacteria Bacteria 60.8 5.6e-9   NR MDO8658572.1 2052151 g5946 i0 58.7 0.811764705882353 46 19 81.2 0 141 4 192 237 MDO8658572.1 glycosyltransferase family 39 protein [Candidatus Levyibacteriota bacterium] diamond 138 60.8 1 Bacteria Bacteria candidate phyla   Candidatus Levyibacteriota         Candidatus Levyibacteriota bacterium
29193122 29193122 PRJNA513467_S_NODE_7909_length_153_cov_2.612069_g7886_i0 PRJNA513467 7909 153 2.612069 3.99646557 Candidatus Levybacteria bacterium RBG_16_35_11 1798584 Bacteria Bacteria 66.6 1.81e-11   NR OGH05949.1 1798584 g7886 i0 59.2 0.96078431372549 49 20 96.1 0 5 151 35 83 OGH05949.1 MAG: hypothetical protein A2W22_03405 [Candidatus Levybacteria bacterium RBG_16_35_11] diamond 147 66.6 1 Bacteria Bacteria candidate phyla   Candidatus Levyibacteriota         Candidatus Levybacteria bacterium RBG_16_35_11
29271281 29271281 PRJNA513467_S_NODE_1729_length_267_cov_2.034783_g1706_i0 PRJNA513467 1729 267 2.034783 5.43287061 Bacillati 1783272 Bacteria Bacteria 70.1 1.1e-11   NR NDK07858.1 2044595 g1706 i0 45.1 1.91011235955056 82 30 92.1 1 247 2 150 216 NDK07858.1 DUF1073 domain-containing protein [Candidatus Altimarinota bacterium] diamond 510 70.1 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
29634587 29634587 PRJNA513467_S_NODE_1950_length_255_cov_1.724771_g1927_i0 PRJNA513467 1950 255 1.724771 4.39816605 Patescibacteria group bacterium 2052139 Bacteria Bacteria 124 2.24e-31   NR MEK7570658.1 2052139 g1927 i0 77.2 0.929411764705882 79 18 92.9 0 10 246 92 170 MEK7570658.1 glycosyltransferase family 39 protein [Patescibacteria group bacterium] diamond 237 124 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
29697711 29697711 PRJNA513467_S_NODE_1130_length_314_cov_2.805054_g1107_i0 PRJNA513467 1130 314 2.805054 8.80786956 Candidatus Curtissbacteria bacterium 2750075 Bacteria Bacteria 181 3.04e-53   NR MDP2632354.1 2750075 g1107 i0 82.7 0.993630573248408 104 18 99.4 0 1 312 129 232 MDP2632354.1 glycosyltransferase family 4 protein [Candidatus Curtissbacteria bacterium] diamond 312 181 1 Bacteria Bacteria candidate phyla   Candidatus Curtissiibacteriota         Candidatus Curtissbacteria bacterium
30503367 30503367 PRJNA513467_S_NODE_1993_length_253_cov_2.962963_g1970_i0 PRJNA513467 1993 253 2.962963 7.49629639 Bacteria 2 Bacteria Bacteria 114 1.69e-29   NR MEK7635454.1 2052139 g1970 i0 74.7 5.300395256917 75 19 88.9 0 3 227 129 203 MEK7635454.1 site-2 protease family protein [Patescibacteria group bacterium] diamond 1341 114 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
30614154 30614154 PRJNA513467_S_NODE_3093_length_214_cov_2.401130_g3070_i0 PRJNA513467 3093 214 2.40113 5.1384182 Candidatus Taylorbacteria bacterium RIFCSPHIGHO2_ 1802301 Bacteria Bacteria 105 6.97e-25   NR OHA17896.1 1802301 g3070 i0 74.6 0.995327102803738 71 18 99.5 0 214 2 219 289 OHA17896.1 MAG: hypothetical protein A2664_00215 [Candidatus Taylorbacteria bacterium RIFCSPHIGHO2_01_FULL_46_22b] diamond 213 105 1 Bacteria Bacteria candidate phyla   Candidatus Tayloriibacteriota         Candidatus Taylorbacteria bacterium RIFCSPHIGHO2_01_FULL_46_22b
31356661 31356661 PRJNA513467_S_NODE_6216_length_167_cov_1.907692_g6193_i0 PRJNA513467 6216 167 1.907692 3.18584564 Bacteria 2 Bacteria Bacteria 79.7 1.22e-15   NR KKP80530.1 1618861 g6193 i0 65.5 1.97604790419162 55 19 98.8 0 166 2 80 134 KKP80530.1 MAG: FAD dependent oxidoreductase, partial [Parcubacteria group bacterium GW2011_GWB1_35_5] diamond 330 79.7 1 Bacteria Bacteria candidate phyla             Parcubacteria group bacterium GW2011_GWB1_35_5
31388318 31388318 PRJNA513467_S_NODE_5876_length_171_cov_1.104478_g5853_i0 PRJNA513467 5876 171 1.104478 1.88865738 Bacteria 2 Bacteria Bacteria 107 9.32e-26   NR KKS03999.1 1618736 g5853 i0 94.6 7.85964912280702 56 3 98.2 0 2 169 123 178 KKS03999.1 MAG: Histidine-tRNA ligase [Candidatus Nomurabacteria bacterium GW2011_GWA2_41_25] diamond 1344 108 0.990740740740741 Bacteria Bacteria candidate phyla   Candidatus Nomuraibacteriota         Candidatus Nomurabacteria bacterium GW2011_GWA2_41_25
32132128 32132128 PRJNA513467_S_NODE_2818_length_221_cov_1.951087_g2795_i0 PRJNA513467 2818 221 1.951087 4.31190227 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 114 3.18e-28   NR MDB5183494.1 2026720 g2795 i0 78.6 1.91402714932127 70 15 95 0 211 2 33 102 MDB5183494.1 exported protein of unknown function [Candidatus Saccharibacteria bacterium] diamond 423 114 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
32147433 32147433 PRJNA513467_S_NODE_4738_length_184_cov_1.945578_g4715_i0 PRJNA513467 4738 184 1.945578 3.57986352 Bacteria 2 Bacteria Bacteria 110 1.89e-26   NR KND46766.1 1659200 g4715 i0 93.4 3.97826086956522 61 4 99.5 0 2 184 247 307 KND46766.1 MAG: virulence factor [Parcubacteria bacterium C7867-006] diamond 732 110 1 Bacteria Bacteria candidate phyla   Candidatus Parcubacteria         Parcubacteria bacterium C7867-006
32700679 32700679 PRJNA513467_S_NODE_4300_length_191_cov_1.012987_g4277_i0 PRJNA513467 4300 191 1.012987 1.93480517 Patescibacteria group bacterium 2052139 Bacteria Bacteria 82.4 3.24e-17   NR MCL6096485.1 2052139 g4277 i0 60.3 3.94240837696335 63 25 99 0 189 1 75 137 MCL6096485.1 NTP transferase domain-containing protein [Patescibacteria group bacterium] diamond 753 82.4 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
32700680 32700680 PRJNA513467_S_NODE_7000_length_160_cov_1.585366_g6977_i0 PRJNA513467 7000 160 1.585366 2.5365856 Candidatus Niyogibacteria bacterium 2750078 Bacteria Bacteria 43.9 0.00206   NR MBI2038746.1 2750078 g6977 i0 69.4 0.675 36 10 67.5 1 3 110 104 138 MBI2038746.1 30S ribosomal protein S6 [Candidatus Niyogibacteria bacterium] diamond 108 43.9 1 Bacteria Bacteria candidate phyla   Candidatus Niyogiibacteriota         Candidatus Niyogibacteria bacterium
32732450 32732450 PRJNA513467_S_NODE_1900_length_257_cov_3.081818_g1877_i0 PRJNA513467 1900 257 3.081818 7.92027226 Candidatus Jorgensenbacteria bacterium GW2 2268185 Bacteria Bacteria 109 3.73e-26   NR KKU91415.1 1618660 g1877 i0 61 0.957198443579767 82 31 95.7 1 257 12 99 179 KKU91415.1 MAG: PDK repeat-containing protein [Candidatus Jorgensenbacteria bacterium GW2011_GWA1_48_11] diamond 246 109 1 Bacteria Bacteria candidate phyla   Candidatus Joergenseniibacteriota         Candidatus Jorgensenbacteria bacterium GW2011_GWA1_48_11

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;