RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA512103" and tax_kingdom = "Thermoproteati"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Thermoproteati · 2 ✖

bioproject 1

  • PRJNA512103 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27298461 27298461 PRJNA512103_P_NODE_31203_length_168_cov_0.873950_g30791_i0 PRJNA512103 31203 168 0.87395 1.468236 Nitrososphaerales archaeon 2268197 Archaea Archaea 41.2 0.0469   NR MEM3538584.1 2268197 g30791 i0 45 0.714285714285714 40 19 71.4 1 143 24 265 301 MEM3538584.1 TGS domain-containing protein [Nitrososphaerales archaeon] diamond 120 41.2 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales     Nitrososphaerales archaeon
30171864 30171864 PRJNA512103_P_NODE_7732_length_467_cov_1.397129_g7323_i0 PRJNA512103 7732 467 1.397129 6.52459243 Nitrososphaerota archaeon 2026795 Archaea Archaea 55.5 1.5e-5   NR MDG6921989.1 2026795 g7323 i0 26.8 1.00856531049251 157 100 95.1 4 15 458 526 676 MDG6921989.1 hypothetical protein [Nitrososphaerota archaeon] diamond 471 55.5 1 Archaea   Thermoproteati Nitrososphaerota         Nitrososphaerota archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;