RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA509429" and tax_phylum = "Duplornaviricota"

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tax_superkingdom 1

tax_phylum 1

  • Duplornaviricota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA509429 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27961545 27961545 PRJNA509429_P_NODE_31545_length_216_cov_2.458564_g30717_i0 PRJNA509429 31545 216 2.458564 5.31049824 Totiviridae sp. 1955172 Viruses Viruses 73.2 4.83e-13   NR UHS72494.1 1955172 g30717 i0 51.4 1.94444444444444 70 34 97.2 0 2 211 451 520 UHS72494.1 MAG: putative gag protein [Totiviridae sp.] diamond 420 73.2 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Totiviridae   Totiviridae sp.
29350897 29350897 PRJNA509429_P_NODE_9_length_6747_cov_13.112038_g3_i0 PRJNA509429 9 6747 13.112038 884.66920386 Phytophthora dsRNA virus 1 3071755 Viruses Viruses 73.6 1.13e-8   NR WMI51970.1 3071755 g3 i0 27.6 0.246331702979102 402 218 15.8 19 4646 5713 75 449 WMI51970.1 RNA-dependent RNA polymerase [Phytophthora dsRNA virus 1] diamond 1662 73.6 1 Viruses   Orthornavirae Duplornaviricota         Phytophthora dsRNA virus 1

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;