RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA509429" and tax_phylum = "Basidiomycota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Basidiomycota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA509429 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28056160 28056160 PRJNA509429_P_NODE_44285_length_168_cov_1.345865_g43457_i0 PRJNA509429 44285 168 1.345865 2.2610532 Pterula gracilis 1884261 Fungi Fungi 42 0.0265   NR TFL02954.1 1884261 g43457 i0 43.2 0.785714285714286 44 22 73.2 1 19 141 363 406 TFL02954.1 hypothetical protein BDV98DRAFT_603303 [Pterula gracilis] diamond 132 42 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Agaricales Pterulaceae Pterulicium Pterulicium gracile
31277773 31277773 PRJNA509429_P_NODE_36295_length_194_cov_4.603774_g35467_i0 PRJNA509429 36295 194 4.603774 8.93132156 Postia placenta MAD-698-R-SB12 670580 Fungi Fungi 42 0.0109   NR XP_024332827.1 670580 g35467 i0 56.3 1.05154639175258 32 14 49.5 0 6 101 37 68 XP_024332827.1 hypothetical protein POSPLADRAFT_1161368, partial [Postia placenta MAD-698-R-SB12] diamond 204 42 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Polyporales Adustoporiaceae Rhodonia Rhodonia placenta

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;