RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA509429" and tax_phylum = "Ascomycota"

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tax_superkingdom 1

tax_phylum 1

  • Ascomycota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA509429 · 3 ✖

analysis 1

  • diamond · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26918989 26918989 PRJNA509429_P_NODE_43102_length_171_cov_2.691176_g42274_i0 PRJNA509429 43102 171 2.691176 4.60191096 Cercospora zeae-maydis SCOH1-5 717836 Fungi Fungi 47.8 2.66e-5   NR KAF2206173.1 717836 g42274 i0 65.6 1.12280701754386 32 11 56.1 0 38 133 11 42 KAF2206173.1 hypothetical protein CERZMDRAFT_17248, partial [Cercospora zeae-maydis SCOH1-5] diamond 192 47.8 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Mycosphaerellales Mycosphaerellaceae Cercospora Cercospora zeae-maydis
29255868 29255868 PRJNA509429_P_NODE_48149_length_158_cov_1.333333_g47321_i0 PRJNA509429 48149 158 1.333333 2.10666614 Plenodomus lindquistii 301713 Fungi Fungi 42 0.0117   NR KAI8934495.1 301713 g47321 i0 48.8 0.816455696202532 43 22 81.6 0 150 22 62 104 KAI8934495.1 hypothetical protein NX059_008196 [Plenodomus lindquistii] diamond 129 42 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Pleosporales Leptosphaeriaceae Plenodomus Plenodomus lindquistii
32732445 32732445 PRJNA509429_P_NODE_42580_length_173_cov_1.376812_g41752_i0 PRJNA509429 42580 173 1.376812 2.38188476 Candida parapsilosis 5480 Fungi Fungi 41.6 0.0379   NR CAL1192136.1 5480 g41752 i0 45.5 1.52601156069364 44 24 76.3 0 141 10 363 406 CAL1192136.1 unnamed protein product [Candida parapsilosis] diamond 264 41.6 1 Eukaryota Opisthokonta Fungi Ascomycota Pichiomycetes Serinales Debaryomycetaceae Candida Candida parapsilosis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;