RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA506002" and tax_superkingdom = "Viruses"

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tax_phylum 2

tax_kingdom 2

tax_superkingdom 1

  • Viruses · 3 ✖

bioproject 1

  • PRJNA506002 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27740804 27740804 PRJNA506002_S_NODE_16524_length_363_cov_1.462069_g16278_i0 PRJNA506002 16524 363 1.462069 5.30731047 Caudoviricetes sp. 2832643 Viruses Viruses 66.6 1.25e-10   NR DAH62254.1 2832643 g16278 i0 73.8 0.347107438016529 42 11 34.7 0 166 291 1 42 DAH62254.1 MAG TPA: hypothetical protein [Caudoviricetes sp.] diamond 126 66.6 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
28782240 28782240 PRJNA506002_S_NODE_21087_length_340_cov_2.247191_g20841_i0 PRJNA506002 21087 340 2.247191 7.6404494 Adintovirus bos4377 3115894 Viruses Viruses 85.5 3.5e-18   NR DBA50495.1 3115894 g20841 i0 59.7 0.547058823529412 62 23 52.9 1 340 161 110 171 DBA50495.1 MAG TPA_asm: Adenain [Adintovirus bos4377] diamond 186 85.5 1 Viruses   Bamfordvirae Preplasmiviricota Polintoviricetes Orthopolintovirales Adintoviridae   Adintovirus bos4377
32036983 32036983 PRJNA506002_S_NODE_13178_length_384_cov_1.736334_g12932_i0 PRJNA506002 13178 384 1.736334 6.66752256 Pimephales minnow adintovirus 2609864 Viruses Viruses 160 4.6e-45   NR DAC81401.1 2609864 g12932 i0 74 1.625 104 27 81.3 0 312 1 122 225 DAC81401.1 TPA_asm: integrase [Pimephales minnow adintovirus] diamond 624 160 1 Viruses   Bamfordvirae Preplasmiviricota Polintoviricetes Orthopolintovirales Adintoviridae   Pimephales minnow adintovirus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;