RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "diamond", bioproject = "PRJNA505837" and tax_phylum = "Mucoromycota"

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tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA505837 · 4 ✖

analysis 1

  • diamond · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27519476 27519476 PRJNA505837_S_NODE_343_length_248_cov_3.707763_g328_i0 PRJNA505837 343 248 3.707763 9.19525224 Mucor ambiguus 91626 Fungi Fungi 151 1.12e-44   NR GAN07079.1 91626 g328 i0 95.1 0.991935483870968 82 4 99.2 0 2 247 61 142 GAN07079.1 conserved hypothetical protein [Mucor ambiguus] diamond 246 151 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mucoraceae Mucor Mucor ambiguus
28656224 28656224 PRJNA505837_S_NODE_527_length_198_cov_4.887574_g512_i0 PRJNA505837 527 198 4.887574 9.67739652 Mucor lusitanicus 29924 Fungi Fungi 146 1.53e-43   NR KAF1796850.1 29924 g512 i0 100 2 66 0 100 0 1 198 53 118 KAF1796850.1 hypothetical protein FB192DRAFT_1403992 [Mucor lusitanicus] diamond 396 146 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mucoraceae Mucor Mucor lusitanicus
30993430 30993430 PRJNA505837_S_NODE_394_length_230_cov_4.875622_g379_i0 PRJNA505837 394 230 4.875622 11.2139306 Mucor lusitanicus 29924 Fungi Fungi 96.3 3.5999999999999986e-24   NR KAF1799313.1 29924 g379 i0 100 0.6 46 0 60 0 3 140 31 76 KAF1799313.1 hypothetical protein FB192DRAFT_1386114 [Mucor lusitanicus] diamond 138 96.3 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mucoraceae Mucor Mucor lusitanicus
32290472 32290472 PRJNA505837_S_NODE_279_length_270_cov_3.460581_g264_i0 PRJNA505837 279 270 3.460581 9.3435687 Mucor lusitanicus CBS 277.49 747725 Fungi Fungi 80.1 3.41e-17   NR OAC99592.1 747725 g264 i0 97.4 0.433333333333333 39 1 43.3 0 250 134 1 39 OAC99592.1 hypothetical protein MUCCIDRAFT_114785 [Mucor lusitanicus CBS 277.49] diamond 117 80.1 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mucoraceae Mucor Mucor lusitanicus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;