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contig_metadata

31 rows where analysis = "diamond", bioproject = "PRJNA505329" and tax_phylum = "Myxococcota"

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tax_superkingdom 1

tax_phylum 1

  • Myxococcota · 31 ✖

tax_kingdom 1

bioproject 1

  • PRJNA505329 · 31 ✖

analysis 1

  • diamond · 31 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2385913 2385913 PRJNA505329_P_NODE_43722_length_167_cov_2.610169_g43251_i0 PRJNA505329 43722 167 2.610169 4.35898223 Sorangium cellulosum 56 Bacteria Bacteria 108 1.7500000000000002e-26   NR WP_129356064.1 56 g43251 i0 90.6 3.80838323353293 53 5 95.2 0 8 166 157 209 WP_129356064.1 galactose-1-phosphate uridylyltransferase [Sorangium cellulosum] diamond 636 108 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae Sorangium Sorangium cellulosum
3034724 3034724 PRJNA505329_P_NODE_52483_length_152_cov_3.475728_g52012_i0 PRJNA505329 52483 152 3.475728 5.28310656 Archangium gephyra 48 Bacteria Bacteria 91.3 3.52e-20   NR PZR07847.1 48 g52012 i0 84 0.986842105263158 50 8 98.7 0 2 151 180 229 PZR07847.1 MAG: hypothetical protein DI536_26140 [Archangium gephyra] diamond 150 91.3 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Archangiaceae Archangium Archangium gephyra
8763294 8763294 PRJNA505329_P_NODE_26767_length_192_cov_1.433566_g26296_i0 PRJNA505329 26767 192 1.433566 2.75244672 Myxococcia 32015 Bacteria Bacteria 110 7.78e-27   NR WP_012827659.1 80816 g26296 i0 76.2 41.34375 63 15 98.4 0 191 3 169 231 WP_012827659.1 RNA polymerase factor sigma-32 [Haliangium ochraceum] diamond 7938 111 0.990990990990991 Bacteria   Pseudomonadati Myxococcota   Haliangiales Kofleriaceae Haliangium Haliangium ochraceum
13237269 13237269 PRJNA505329_P_NODE_32731_length_183_cov_2.246269_g32260_i0 PRJNA505329 32731 183 2.246269 4.11067227 Myxococcales bacterium 2026763 Bacteria Bacteria 127 2.62e-32   NR MBL8947525.1 2026763 g32260 i0 93.2 0.967213114754098 59 4 96.7 0 181 5 1223 1281 MBL8947525.1 TonB family protein [Myxococcales bacterium] diamond 177 127 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium
14512305 14512305 PRJNA505329_P_NODE_30852_length_186_cov_1.496350_g30381_i0 PRJNA505329 30852 186 1.49635 2.783211 Myxococcota bacterium 2818507 Bacteria Bacteria 116 1.25e-28   NR HEY1101075.1 2818507 g30381 i0 96.7 0.967741935483871 60 2 96.8 0 3 182 52 111 HEY1101075.1 HD domain-containing phosphohydrolase [Myxococcota bacterium] diamond 180 116 1 Bacteria   Pseudomonadati Myxococcota         Myxococcota bacterium
17060824 17060824 PRJNA505329_P_NODE_40494_length_171_cov_1.688525_g40023_i0 PRJNA505329 40494 171 1.688525 2.88737775 Polyangiaceae bacterium 2268199 Bacteria Bacteria 102 8.44e-24   NR MFO0589833.1 2268199 g40023 i0 91.1 0.982456140350877 56 5 98.2 0 4 171 252 307 MFO0589833.1 glycosyltransferase [Polyangiaceae bacterium] diamond 168 102 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae   Polyangiaceae bacterium
24062339 24062339 PRJNA505329_P_NODE_45939_length_165_cov_2.655172_g45468_i0 PRJNA505329 45939 165 2.655172 4.3810338 Polyangiaceae bacterium 2268199 Bacteria Bacteria 97.4 2.15e-22   NR MFO0618717.1 2268199 g45468 i0 87 2.94545454545455 54 7 98.2 0 164 3 223 276 MFO0618717.1 DEAD/DEAH box helicase [Polyangiaceae bacterium] diamond 486 97.4 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae   Polyangiaceae bacterium
26918927 26918927 PRJNA505329_P_NODE_41962_length_169_cov_1.691667_g41491_i0 PRJNA505329 41962 169 1.691667 2.85891723 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 96.7 1.36e-21   NR MBK6690531.1 2026735 g41491 i0 92.6 0.958579881656805 54 4 95.9 0 167 6 185 238 MBK6690531.1 copper-translocating P-type ATPase [Deltaproteobacteria bacterium] diamond 162 96.7 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
27139932 27139932 PRJNA505329_P_NODE_30842_length_186_cov_1.496350_g30371_i0 PRJNA505329 30842 186 1.49635 2.783211 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 40 0.0297   NR MCB2188626.1 2026735 g30371 i0 33.3 0.967741935483871 60 40 96.8 0 2 181 2 61 MCB2188626.1 hypothetical protein [Deltaproteobacteria bacterium] diamond 180 40 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
27266775 27266775 PRJNA505329_P_NODE_40903_length_170_cov_2.545455_g40432_i0 PRJNA505329 40903 170 2.545455 4.3272735 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 58.9 2.51e-8   NR MBM4279540.1 2026735 g40432 i0 54.5 1.94117647058824 55 25 97.1 0 4 168 210 264 MBM4279540.1 hypothetical protein [Deltaproteobacteria bacterium] diamond 330 58.9 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
27361804 27361804 PRJNA505329_P_NODE_48563_length_163_cov_1.710526_g48092_i0 PRJNA505329 48563 163 1.710526 2.78815738 Sandaracinaceae bacterium LLY-WYZ-13_1 3034333 Bacteria Bacteria 51.6 8.98e-6   NR HJL14997.1 3034333 g48092 i0 84.6 2.39263803680982 26 4 47.9 0 3 80 375 400 HJL14997.1 geranylgeranyl diphosphate reductase [Sandaracinaceae bacterium LLY-WYZ-13_1] diamond 390 51.6 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Sandaracinaceae   Sandaracinaceae bacterium LLY-WYZ-13_1
28182263 28182263 PRJNA505329_P_NODE_43646_length_167_cov_3.457627_g43175_i0 PRJNA505329 43646 167 3.457627 5.77423709 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 76.6 1.48e-14   NR MBW1953670.1 2026735 g43175 i0 62.3 0.952095808383233 53 20 95.2 0 164 6 100 152 MBW1953670.1 hypothetical protein [Deltaproteobacteria bacterium] diamond 159 76.6 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
28277075 28277075 PRJNA505329_P_NODE_45746_length_166_cov_0.888889_g45275_i0 PRJNA505329 45746 166 0.888889 1.47555574 Polyangiales bacterium 3034171 Bacteria Bacteria 46.6 5.56e-4   NR MFT5355050.1 3034171 g45275 i0 50.9 0.957831325301205 53 23 95.8 1 6 164 161 210 MFT5355050.1 branched-chain amino acid transport system substrate-binding protein [Polyangiales bacterium] diamond 159 46.6 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales     Polyangiales bacterium
28971937 28971937 PRJNA505329_P_NODE_29088_length_188_cov_3.410072_g28617_i0 PRJNA505329 29088 188 3.410072 6.41093536 Myxococcales bacterium 2026763 Bacteria Bacteria 115 4.400000000000001e-28   NR MCA9586032.1 2026763 g28617 i0 80.6 0.98936170212766 62 12 98.9 0 1 186 220 281 MCA9586032.1 hypothetical protein [Myxococcales bacterium] diamond 186 115 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium
29098248 29098248 PRJNA505329_P_NODE_48688_length_163_cov_0.912281_g48217_i0 PRJNA505329 48688 163 0.912281 1.48701803 Sorangium cellulosum 56 Bacteria Bacteria 67 3.33e-11   NR KYF80335.1 56 g48217 i0 59.6 0.957055214723926 52 21 95.7 0 3 158 184 235 KYF80335.1 hypothetical protein BE17_49480 [Sorangium cellulosum] diamond 156 67 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae Sorangium Sorangium cellulosum
29287505 29287505 PRJNA505329_P_NODE_48709_length_163_cov_0.912281_g48238_i0 PRJNA505329 48709 163 0.912281 1.48701803 Kofleriaceae bacterium 2212474 Bacteria Bacteria 73.2 2.34e-13   NR HTL32719.1 2212474 g48238 i0 74.5 0.938650306748466 51 13 93.9 0 8 160 383 433 HTL32719.1 HD domain-containing phosphohydrolase [Kofleriaceae bacterium] diamond 153 73.2 1 Bacteria   Pseudomonadati Myxococcota   Haliangiales Kofleriaceae   Kofleriaceae bacterium
29445275 29445275 PRJNA505329_P_NODE_35670_length_178_cov_3.178295_g35199_i0 PRJNA505329 35670 178 3.178295 5.6573651 Kofleriaceae bacterium 2212474 Bacteria Bacteria 122 1.42e-30   NR HUS31674.1 2212474 g35199 i0 93.2 5.96629213483146 59 4 99.4 0 1 177 752 810 HUS31674.1 hypothetical protein [Kofleriaceae bacterium] diamond 1062 122 1 Bacteria   Pseudomonadati Myxococcota   Haliangiales Kofleriaceae   Kofleriaceae bacterium
29555500 29555500 PRJNA505329_P_NODE_46410_length_165_cov_1.318966_g45939_i0 PRJNA505329 46410 165 1.318966 2.1762939 Bacteria 2 Bacteria Bacteria 99.8 1.08e-22   NR MBI4822275.1 2026735 g45939 i0 85.2 4.85454545454545 54 8 98.2 0 164 3 178 231 MBI4822275.1 endonuclease MutS2 [Deltaproteobacteria bacterium] diamond 801 100 0.998 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
29792612 29792612 PRJNA505329_P_NODE_33331_length_182_cov_2.308271_g32860_i0 PRJNA505329 33331 182 2.308271 4.20105322 Polyangiaceae bacterium 2268199 Bacteria Bacteria 84 4.89e-17   NR HRG99594.1 2268199 g32860 i0 66.1 2.91758241758242 59 20 97.3 0 3 179 541 599 HRG99594.1 beta-propeller domain-containing protein [Polyangiaceae bacterium] diamond 531 84 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae   Polyangiaceae bacterium
29839800 29839800 PRJNA505329_P_NODE_19091_length_202_cov_5.601307_g18620_i0 PRJNA505329 19091 202 5.601307 11.31464014 Myxococcia 32015 Bacteria Bacteria 70.1 4.82e-12   NR MBL8679086.1 2026763 g18620 i0 100 0.98019801980198 33 0 49 0 6 104 615 647 MBL8679086.1 transcription-repair coupling factor [Myxococcales bacterium] diamond 198 70.1 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium
30187230 30187230 PRJNA505329_P_NODE_44732_length_166_cov_3.504274_g44261_i0 PRJNA505329 44732 166 3.504274 5.81709484 Myxococcia 32015 Bacteria Bacteria 41.6 0.0331   NR WP_146650486.1 1391654 g44261 i0 44.2 1.55421686746988 43 24 77.7 0 38 166 1 43 WP_146650486.1 hypothetical protein [Labilithrix luteola] diamond 258 42 0.990476190476191 Bacteria   Pseudomonadati Myxococcota   Polyangiales Labilitrichaceae Labilithrix Labilithrix luteola
30235035 30235035 PRJNA505329_P_NODE_45932_length_165_cov_2.655172_g45461_i0 PRJNA505329 45932 165 2.655172 4.3810338 Myxococcaceae bacterium 2484252 Bacteria Bacteria 70.5 1.13e-12   NR MBL8956430.1 2484252 g45461 i0 71.7 0.963636363636364 53 15 96.4 0 6 164 140 192 MBL8956430.1 hypothetical protein [Myxococcaceae bacterium] diamond 159 70.5 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Myxococcaceae   Myxococcaceae bacterium
30330332 30330332 PRJNA505329_P_NODE_42452_length_169_cov_0.866667_g41981_i0 PRJNA505329 42452 169 0.866667 1.46466723 Minicystis sp. 1971901 Bacteria Bacteria 64.7 2.32e-10   NR MFT3776345.1 1971901 g41981 i0 57.7 1.88165680473373 52 20 92.3 1 9 164 340 389 MFT3776345.1 hypothetical protein [Minicystis sp.] diamond 318 64.7 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae Minicystis Minicystis sp.
30393501 30393501 PRJNA505329_P_NODE_11413_length_233_cov_3.467391_g10942_i0 PRJNA505329 11413 233 3.467391 8.07902103 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 42.4 0.0422   NR MBN8611173.1 2026735 g10942 i0 57.6 0.424892703862661 33 14 42.5 0 3 101 229 261 MBN8611173.1 hypothetical protein [Deltaproteobacteria bacterium] diamond 99 42.4 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
30787658 30787658 PRJNA505329_P_NODE_37414_length_176_cov_1.614173_g36943_i0 PRJNA505329 37414 176 1.614173 2.84094448 Sandaracinus 1055688 Bacteria Bacteria 104 1.19e-24   NR WP_236604140.1 927083 g36943 i0 87.7 1.94318181818182 57 7 97.2 0 174 4 90 146 WP_236604140.1 DUF4350 domain-containing protein [Sandaracinus amylolyticus] diamond 342 104 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Sandaracinaceae Sandaracinus Sandaracinus amylolyticus
31103449 31103449 PRJNA505329_P_NODE_24675_length_195_cov_3.424658_g24204_i0 PRJNA505329 24675 195 3.424658 6.6780831 Myxococcales 29 Bacteria Bacteria 70.1 4.08e-12   NR MFT3708477.1 1872627 g24204 i0 94.1 5.69230769230769 34 2 52.3 0 106 5 286 319 MFT3708477.1 imidazolonepropionase [Archangium sp.] diamond 1110 70.1 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Archangiaceae Archangium Archangium sp.
31277702 31277702 PRJNA505329_P_NODE_31095_length_185_cov_3.647059_g30624_i0 PRJNA505329 31095 185 3.647059 6.74705915 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 82.4 8.93e-17   NR MBI4529405.1 2026735 g30624 i0 68.9 0.989189189189189 61 19 98.9 0 2 184 11 71 MBI4529405.1 ABC transporter substrate-binding protein [Deltaproteobacteria bacterium] diamond 183 82.4 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
31341063 31341063 PRJNA505329_P_NODE_22036_length_200_cov_4.344371_g21565_i0 PRJNA505329 22036 200 4.344371 8.688742 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 60.8 8.44e-9   NR MBW1831755.1 2026735 g21565 i0 52.3 3.9 65 31 97.5 0 2 196 309 373 MBW1831755.1 TolC family protein [Deltaproteobacteria bacterium] diamond 780 60.8 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
31467763 31467763 PRJNA505329_P_NODE_37716_length_175_cov_2.452381_g37245_i0 PRJNA505329 37716 175 2.452381 4.29166675 Myxococcales bacterium 2026763 Bacteria Bacteria 81.3 5.25e-17   NR MDP1917948.1 2026763 g37245 i0 70.2 0.977142857142857 57 17 97.7 0 3 173 86 142 MDP1917948.1 hypothetical protein [Myxococcales bacterium] diamond 171 81.3 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium
32385029 32385029 PRJNA505329_P_NODE_25519_length_194_cov_1.855172_g25048_i0 PRJNA505329 25519 194 1.855172 3.59903368 Myxococcota bacterium 2818507 Bacteria Bacteria 63.5 2.58e-10   NR MDQ3035999.1 2818507 g25048 i0 87.5 0.494845360824742 32 4 49.5 0 95 190 141 172 MDQ3035999.1 hypothetical protein [Myxococcota bacterium] diamond 96 63.5 1 Bacteria   Pseudomonadati Myxococcota         Myxococcota bacterium
32416770 32416770 PRJNA505329_P_NODE_22859_length_199_cov_4.086667_g22388_i0 PRJNA505329 22859 199 4.086667 8.13246733 Myxococcales bacterium 2026763 Bacteria Bacteria 44.7 0.00432   NR RYE83057.1 2026763 g22388 i0 60 1.17587939698492 30 12 45.2 0 93 4 113 142 RYE83057.1 MAG: exodeoxyribonuclease V subunit alpha, partial [Myxococcales bacterium] diamond 234 44.7 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;