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contig_metadata

33 rows where analysis = "diamond", bioproject = "PRJNA505329" and tax_phylum = "Deinococcota"

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tax_superkingdom 1

tax_phylum 1

  • Deinococcota · 33 ✖

tax_kingdom 1

bioproject 1

  • PRJNA505329 · 33 ✖

analysis 1

  • diamond · 33 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
483291 483291 PRJNA505329_P_NODE_25601_length_193_cov_4.798611_g25130_i0 PRJNA505329 25601 193 4.798611 9.26131923 Deinococcus reticulitermitis 856736 Bacteria Bacteria 80.5 9.27e-16   NR WP_177183206.1 856736 g25130 i0 68.3 0.979274611398964 63 13 87 1 191 24 907 969 WP_177183206.1 EAL domain-containing protein [Deinococcus reticulitermitis] diamond 189 80.5 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus reticulitermitis
26728466 26728466 PRJNA505329_P_NODE_14501_length_233_cov_2.755435_g14030_i0 PRJNA505329 14501 233 2.755435 6.42016355 Thermus scotoductus 37636 Bacteria Bacteria 65.5 8.93e-12   NR WP_126201404.1 37636 g14030 i0 100 1.14592274678112 28 0 36.1 0 101 18 67 94 WP_126201404.1 hypothetical protein [Thermus scotoductus] diamond 267 65.5 1 Bacteria   Thermotogati Deinococcota Deinococci Thermales Thermaceae Thermus Thermus scotoductus
27108463 27108463 PRJNA505329_P_NODE_20842_length_201_cov_3.355263_g20371_i0 PRJNA505329 20842 201 3.355263 6.74407863 Deinococcus fonticola 2528713 Bacteria Bacteria 67 4.74e-11   NR WP_135228206.1 2528713 g20371 i0 96.9 0.477611940298507 32 1 47.8 0 6 101 291 322 WP_135228206.1 DHH family phosphoesterase [Deinococcus fonticola] diamond 96 67 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus fonticola
27123839 27123839 PRJNA505329_P_NODE_32402_length_183_cov_4.992537_g31931_i0 PRJNA505329 32402 183 4.992537 9.13634271 Deinococci 188787 Bacteria Bacteria 94.7 2.7e-21   NR MCA9838719.1 2026798 g31931 i0 74.5 1.86885245901639 55 14 90.2 0 167 3 252 306 MCA9838719.1 PA0069 family radical SAM protein [Trueperaceae bacterium] diamond 342 95.5 0.991623036649215 Bacteria   Thermotogati Deinococcota Deinococci Trueperales Trueperaceae   Trueperaceae bacterium
27487937 27487937 PRJNA505329_P_NODE_17043_length_227_cov_6.207865_g16572_i0 PRJNA505329 17043 227 6.207865 14.09185355 Deinococcus marmoris 249408 Bacteria Bacteria 107 1.04e-26   NR WP_075832255.1 249408 g16572 i0 58.8 1.28193832599119 97 8 85.9 1 6 200 77 173 WP_075832255.1 nucleotidyltransferase family protein [Deinococcus marmoris] diamond 291 107 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus marmoris
27614336 27614336 PRJNA505329_P_NODE_42644_length_168_cov_2.588235_g42173_i0 PRJNA505329 42644 168 2.588235 4.3482348 Deinococcus reticulitermitis 856736 Bacteria Bacteria 49.3 6.35e-5   NR WP_092264563.1 856736 g42173 i0 92.6 0.482142857142857 27 2 48.2 0 87 167 1 27 WP_092264563.1 phenylalanine--tRNA ligase subunit alpha [Deinococcus reticulitermitis] diamond 81 49.3 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus reticulitermitis
28119281 28119281 PRJNA505329_P_NODE_35745_length_178_cov_2.953488_g35274_i0 PRJNA505329 35745 178 2.953488 5.25720864 Meiothermus sp. 1955249 Bacteria Bacteria 106 7.31e-26   NR WP_314135247.1 1955249 g35274 i0 96.6 2.93258426966292 58 2 97.8 0 4 177 252 309 WP_314135247.1 permease [Meiothermus sp.] diamond 522 106 1 Bacteria   Thermotogati Deinococcota Deinococci Thermales Thermaceae Meiothermus Meiothermus sp.
28371863 28371863 PRJNA505329_P_NODE_35926_length_178_cov_2.217054_g35455_i0 PRJNA505329 35926 178 2.217054 3.94635612 Deinococcota bacterium 1913990 Bacteria Bacteria 47.4 3.52e-4   NR MDQ3397253.1 1913990 g35455 i0 34.5 0.97752808988764 58 38 97.8 0 4 177 16 73 MDQ3397253.1 hypothetical protein [Deinococcota bacterium] diamond 174 47.4 1 Bacteria   Thermotogati Deinococcota         Deinococcota bacterium
28466819 28466819 PRJNA505329_P_NODE_45566_length_166_cov_0.888889_g45095_i0 PRJNA505329 45566 166 0.888889 1.47555574 Meiothermus sp. 1955249 Bacteria Bacteria 42 0.0183   NR GIW31500.1 1955249 g45095 i0 38 0.903614457831325 50 30 90.4 1 159 10 36 84 GIW31500.1 MAG: hypothetical protein KatS3mg071_1674 [Meiothermus sp.] diamond 150 42 1 Bacteria   Thermotogati Deinococcota Deinococci Thermales Thermaceae Meiothermus Meiothermus sp.
28529963 28529963 PRJNA505329_P_NODE_13587_length_233_cov_2.777174_g13116_i0 PRJNA505329 13587 233 2.777174 6.47081542 Allomeiothermus silvanus 52022 Bacteria Bacteria 68.2 1.57e-11   NR WP_276959398.1 52022 g13116 i0 96.9 0.824034334763948 32 1 41.2 0 227 132 1 32 WP_276959398.1 ABC transporter permease [Allomeiothermus silvanus] diamond 192 68.2 1 Bacteria   Thermotogati Deinococcota Deinococci Thermales Thermaceae Allomeiothermus Allomeiothermus silvanus
28624754 28624754 PRJNA505329_P_NODE_43927_length_167_cov_1.745763_g43456_i0 PRJNA505329 43927 167 1.745763 2.91542421 uncultured Truepera sp. 543023 Bacteria Bacteria 60.8 5.38e-9   NR CAA9566744.1 543023 g43456 i0 72.3 0.844311377245509 47 13 84.4 0 4 144 355 401 CAA9566744.1 MAG: Permease of the drug/metabolite transporter (DMT) superfamily [uncultured Truepera sp.] diamond 141 60.8 1 Bacteria   Thermotogati Deinococcota Deinococci Trueperales Trueperaceae Truepera uncultured Truepera sp.
28750825 28750825 PRJNA505329_P_NODE_22247_length_200_cov_3.695364_g21776_i0 PRJNA505329 22247 200 3.695364 7.390728 Deinococcus sp. RM 2316359 Bacteria Bacteria 71.2 1.81e-13   NR WP_233555274.1 2316359 g21776 i0 93.9 0.495 33 2 49.5 0 197 99 43 75 WP_233555274.1 hypothetical protein [Deinococcus sp. RM] diamond 99 71.2 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus sp. RM
28940489 28940489 PRJNA505329_P_NODE_46728_length_165_cov_0.896552_g46257_i0 PRJNA505329 46728 165 0.896552 1.4793108 Deinococcus sp. DB 47478 Bacteria Bacteria 112 1.88e-28   NR WP_198296855.1 2479203 g46257 i0 100 0.963636363636364 53 0 96.4 0 3 161 237 289 WP_198296855.1 manganese catalase family protein [Deinococcus sp. DB0503] diamond 159 112 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus sp. DB0503
29066715 29066715 PRJNA505329_P_NODE_18848_length_204_cov_4.219355_g18377_i0 PRJNA505329 18848 204 4.219355 8.6074842 Deinococcus fonticola 2528713 Bacteria Bacteria 99 3.49e-22   NR WP_135230003.1 2528713 g18377 i0 38.2 2.5 170 2 98.5 1 202 2 114 283 WP_135230003.1 DarT ssDNA thymidine ADP-ribosyltransferase family protein [Deinococcus fonticola] diamond 510 99 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus fonticola
29350812 29350812 PRJNA505329_P_NODE_22909_length_199_cov_3.920000_g22438_i0 PRJNA505329 22909 199 3.92 7.8008 Meiothermus cerbereus 65552 Bacteria Bacteria 68.6 2e-12   NR WP_027877991.1 65552 g22438 i0 87.9 0.49748743718593 33 4 49.7 0 3 101 133 165 WP_027877991.1 DJ-1/PfpI family protein [Meiothermus cerbereus] diamond 99 68.6 1 Bacteria   Thermotogati Deinococcota Deinococci Thermales Thermaceae Meiothermus Meiothermus cerbereus
29350814 29350814 PRJNA505329_P_NODE_29109_length_188_cov_2.971223_g28638_i0 PRJNA505329 29109 188 2.971223 5.58589924 Deinococcus rhizophilus 3049544 Bacteria Bacteria 57.8 6.59e-9   NR WP_285520889.1 3049544 g28638 i0 57.4 1.5 47 19 73.4 1 143 6 2 48 WP_285520889.1 hypothetical protein [Deinococcus rhizophilus] diamond 282 57.8 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus rhizophilus
29982293 29982293 PRJNA505329_P_NODE_46031_length_165_cov_2.448276_g45560_i0 PRJNA505329 46031 165 2.448276 4.0396554 Deinococcus antarcticus 1298767 Bacteria Bacteria 112 5.07e-30   NR WP_380075669.1 1298767 g45560 i0 100 0.945454545454545 52 0 94.5 0 159 4 54 105 WP_380075669.1 hypothetical protein [Deinococcus antarcticus] diamond 156 112 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus antarcticus
30266987 30266987 PRJNA505329_P_NODE_41732_length_169_cov_1.725000_g41261_i0 PRJNA505329 41732 169 1.725 2.91525 Deinococcus fonticola 2528713 Bacteria Bacteria 100 4.94e-24   NR WP_135230688.1 2528713 g41261 i0 98 1.7396449704142 49 1 87 0 6 152 234 282 WP_135230688.1 IS3 family transposase [Deinococcus fonticola] diamond 294 100 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus fonticola
30425078 30425078 PRJNA505329_P_NODE_21953_length_200_cov_4.721854_g21482_i0 PRJNA505329 21953 200 4.721854 9.443708 Deinococcus humi 662880 Bacteria Bacteria 57.8 1.06e-7   NR WP_184137503.1 662880 g21482 i0 88.2 1.005 34 4 51 0 104 3 692 725 WP_184137503.1 phage/plasmid primase, P4 family [Deinococcus humi] diamond 201 57.8 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus humi
30456602 30456602 PRJNA505329_P_NODE_51933_length_155_cov_2.584906_g51462_i0 PRJNA505329 51933 155 2.584906 4.0066043 Meiothermus hypogaeus 884155 Bacteria Bacteria 88.6 3.12e-19   NR WP_119339819.1 884155 g51462 i0 88 1.93548387096774 50 6 96.8 0 5 154 66 115 WP_119339819.1 hypothetical protein [Meiothermus hypogaeus] diamond 300 88.6 1 Bacteria   Thermotogati Deinococcota Deinococci Thermales Thermaceae Meiothermus Meiothermus hypogaeus
30487853 30487853 PRJNA505329_P_NODE_20333_length_201_cov_3.789474_g19862_i0 PRJNA505329 20333 201 3.789474 7.61684274 Deinococcus piscis 394230 Bacteria Bacteria 110 9.07e-28   NR WP_189642630.1 394230 g19862 i0 75 1.07462686567164 72 10 95.5 1 2 193 185 256 WP_189642630.1 hypothetical protein [Deinococcus piscis] diamond 216 110 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus piscis
30582406 30582406 PRJNA505329_P_NODE_37893_length_175_cov_1.642857_g37422_i0 PRJNA505329 37893 175 1.642857 2.87499975 uncultured Deinococcus sp. 158789 Bacteria Bacteria 62.8 3.21e-11   NR WP_295823102.1 158789 g37422 i0 59.3 0.925714285714286 54 18 92.6 1 164 3 1 50 WP_295823102.1 hypothetical protein [uncultured Deinococcus sp.] diamond 162 62.8 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus uncultured Deinococcus sp.
30898715 30898715 PRJNA505329_P_NODE_49754_length_162_cov_0.920354_g49283_i0 PRJNA505329 49754 162 0.920354 1.49097348 Deinococcus antarcticus 1298767 Bacteria Bacteria 125 2.3e-34   NR WP_380076439.1 1298767 g49283 i0 100 0.981481481481482 53 0 98.1 0 3 161 89 141 WP_380076439.1 polysaccharide deacetylase family protein [Deinococcus antarcticus] diamond 159 125 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus antarcticus
30930169 30930169 PRJNA505329_P_NODE_20534_length_201_cov_3.565789_g20063_i0 PRJNA505329 20534 201 3.565789 7.16723589 Deinococcus saxicola 249406 Bacteria Bacteria 92 9.15e-20   NR WP_415785705.1 249406 g20063 i0 59.2 1.13432835820896 76 14 88.1 1 196 20 656 731 WP_415785705.1 N-6 DNA methylase [Deinococcus saxicola] diamond 228 92 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus saxicola
31246138 31246138 PRJNA505329_P_NODE_31535_length_185_cov_1.507353_g31064_i0 PRJNA505329 31535 185 1.507353 2.78860305 Meiothermus sp. 1955249 Bacteria Bacteria 79.3 1.02e-15   NR MER3481678.1 1955249 g31064 i0 81.7 1.94594594594595 60 11 97.3 0 182 3 66 125 MER3481678.1 ribose ABC transporter permease [Meiothermus sp.] diamond 360 79.3 1 Bacteria   Thermotogati Deinococcota Deinococci Thermales Thermaceae Meiothermus Meiothermus sp.
31246146 31246146 PRJNA505329_P_NODE_46315_length_165_cov_1.741379_g45844_i0 PRJNA505329 46315 165 1.741379 2.87327535 Deinococcus sp. DB 47478 Bacteria Bacteria 54.7 7.62e-7   NR WP_370567316.1 2479203 g45844 i0 56.6 0.963636363636364 53 23 96.4 0 6 164 71 123 WP_370567316.1 O-antigen ligase family protein [Deinococcus sp. DB0503] diamond 159 54.7 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus sp. DB0503
31451521 31451521 PRJNA505329_P_NODE_47876_length_164_cov_0.904348_g47405_i0 PRJNA505329 47876 164 0.904348 1.48313072 Deinococcus 1298 Bacteria Bacteria 86.7 3.15e-18   NR WP_034355233.1 1476583 g47405 i0 83.7 1.86585365853659 49 8 89.6 0 2 148 357 405 WP_034355233.1 TCR/Tet family MFS transporter [Deinococcus phoenicis] diamond 306 87.4 0.991990846681922 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus phoenicis
32100204 32100204 PRJNA505329_P_NODE_39998_length_172_cov_1.666667_g39527_i0 PRJNA505329 39998 172 1.666667 2.86666724 Deinococcus fonticola 2528713 Bacteria Bacteria 115 1.17e-28   NR WP_135230266.1 2528713 g39527 i0 98.2 0.976744186046512 56 1 97.7 0 1 168 217 272 WP_135230266.1 DUF1800 domain-containing protein [Deinococcus fonticola] diamond 168 115 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus fonticola
32322040 32322040 PRJNA505329_P_NODE_15719_length_233_cov_2.565217_g15248_i0 PRJNA505329 15719 233 2.565217 5.97695561 Deinococcus carri 1211323 Bacteria Bacteria 52 3.6e-6   NR WP_345465739.1 1211323 g15248 i0 76.9 0.695278969957081 26 6 33.5 0 3 80 101 126 WP_345465739.1 hypothetical protein [Deinococcus carri] diamond 162 52 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus carri
32543424 32543424 PRJNA505329_P_NODE_45919_length_165_cov_2.655172_g45448_i0 PRJNA505329 45919 165 2.655172 4.3810338 Trueperaceae bacterium 2026798 Bacteria Bacteria 97.4 1.96e-22   NR MBX3139390.1 2026798 g45448 i0 82.7 3.8 52 9 94.5 0 8 163 252 303 MBX3139390.1 Mrp/NBP35 family ATP-binding protein [Trueperaceae bacterium] diamond 627 97.4 1 Bacteria   Thermotogati Deinococcota Deinococci Trueperales Trueperaceae   Trueperaceae bacterium
32669187 32669187 PRJNA505329_P_NODE_22900_length_199_cov_3.986667_g22429_i0 PRJNA505329 22900 199 3.986667 7.93346733 Deinococcus indicus 223556 Bacteria Bacteria 74.3 3.68e-14   NR WP_172418007.1 223556 g22429 i0 97 0.49748743718593 33 1 49.7 0 5 103 185 217 WP_172418007.1 LexA family transcriptional regulator [Deinococcus indicus] diamond 99 74.3 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus indicus
32732385 32732385 PRJNA505329_P_NODE_48000_length_164_cov_0.904348_g47529_i0 PRJNA505329 48000 164 0.904348 1.48313072 Deinococcus sp. DB 47478 Bacteria Bacteria 99 9.43e-23   NR WP_198297299.1 2479203 g47529 i0 100 0.969512195121951 53 0 97 0 161 3 91 143 WP_198297299.1 sensor histidine kinase [Deinococcus sp. DB0503] diamond 159 99 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus sp. DB0503
32858155 32858155 PRJNA505329_P_NODE_22780_length_199_cov_5.340000_g22309_i0 PRJNA505329 22780 199 5.34 10.6266 Deinococcus aetherius 200252 Bacteria Bacteria 49.3 1.17e-5   NR WP_406585084.1 200252 g22309 i0 68.8 0.482412060301508 32 10 48.2 0 3 98 25 56 WP_406585084.1 helix-turn-helix domain-containing protein [Deinococcus aetherius] diamond 96 49.3 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus aetherius

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;