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contig_metadata

7 rows where analysis = "diamond", bioproject = "PRJNA505329" and tax_clade = "Sar"

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tax_phylum 3

tax_superkingdom 1

tax_clade 1

bioproject 1

  • PRJNA505329 · 7 ✖

analysis 1

  • diamond · 7 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28151130 28151130 PRJNA505329_P_NODE_7425_length_268_cov_3.036530_g6954_i0 PRJNA505329 7425 268 3.03653 8.1379004 Cafeteria roenbergensis 33653 SAR_Eukaryotes SAR_Eukaryotes 61.2 1.61e-8   NR KAA0155794.1 33653 g6954 i0 51.8 0.626865671641791 56 27 62.7 0 268 101 125 180 KAA0155794.1 hypothetical protein FNF31_06036 [Cafeteria roenbergensis] diamond 168 61.2 1 Eukaryota Sar     Bigyra Bicosoecida Cafeteriaceae Cafeteria Cafeteria roenbergensis
29193039 29193039 PRJNA505329_P_NODE_32449_length_183_cov_3.813433_g31978_i0 PRJNA505329 32449 183 3.813433 6.97858239 Moneuplotes crassus 5936 SAR_Eukaryotes SAR_Eukaryotes 58.5 4.41e-8   NR CAI2385041.1 5936 g31978 i0 54.2 1.91803278688525 59 27 96.7 0 181 5 883 941 CAI2385041.1 unnamed protein product [Moneuplotes crassus] diamond 351 58.5 1 Eukaryota Sar   Ciliophora Spirotrichea Euplotida Euplotidae Moneuplotes Moneuplotes crassus
31150898 31150898 PRJNA505329_P_NODE_39495_length_172_cov_4.886179_g39024_i0 PRJNA505329 39495 172 4.886179 8.40422788 Nannochloropsis gaditana 72520 SAR_Eukaryotes SAR_Eukaryotes 105 1.12e-24   NR EWM21823.1 72520 g39024 i0 87.7 0.994186046511628 57 7 99.4 0 171 1 261 317 EWM21823.1 calcium-dependent protein kinase [Nannochloropsis gaditana] diamond 171 105 1 Eukaryota Sar     Eustigmatophyceae Eustigmatales Monodopsidaceae Nannochloropsis Nannochloropsis gaditana
31404435 31404435 PRJNA505329_P_NODE_20796_length_201_cov_3.355263_g20325_i0 PRJNA505329 20796 201 3.355263 6.74407863 Ochromonadaceae sp. CCMP2298 483371 SAR_Eukaryotes SAR_Eukaryotes 49.3 9.93e-5   NR KAJ1413306.1 483371 g20325 i0 66.7 0.537313432835821 36 12 53.7 0 200 93 106 141 KAJ1413306.1 hypothetical protein B484DRAFT_402070 [Ochromonadaceae sp. CCMP2298] diamond 108 49.3 1 Eukaryota Sar     Synurophyceae Ochromonadales Ochromonadaceae   Ochromonadaceae sp. CCMP2298
31451522 31451522 PRJNA505329_P_NODE_9816_length_234_cov_2.594595_g9345_i0 PRJNA505329 9816 234 2.594595 6.0713523 Bacillariophyta 2836 SAR_Eukaryotes SAR_Eukaryotes 53.1 5.88e-6   NR KAI2513725.1 210448 g9345 i0 78.1 1.64102564102564 32 7 41 0 100 5 70 101 KAI2513725.1 hypothetical protein MHU86_508 [Fragilaria crotonensis] diamond 384 53.1 1 Eukaryota Sar   Bacillariophyta Fragilariophyceae Fragilariales Fragilariaceae Fragilaria Fragilaria crotonensis
32036975 32036975 PRJNA505329_P_NODE_41678_length_169_cov_2.033333_g41207_i0 PRJNA505329 41678 169 2.033333 3.43633277 Bacillariaceae sp. 3061772 SAR_Eukaryotes SAR_Eukaryotes 51.2 1.36e-5   NR KAL3921579.1 3061772 g41207 i0 53.8 2.76923076923077 52 23 90.5 1 164 12 162 213 KAL3921579.1 MAG: hypothetical protein SGILL_002674 [Bacillariaceae sp.] diamond 468 51.2 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Bacillariales Bacillariaceae   Bacillariaceae sp.
32448551 32448551 PRJNA505329_P_NODE_30499_length_186_cov_2.985401_g30028_i0 PRJNA505329 30499 186 2.985401 5.55284586 Cercozoa sp. M6MM 1215613 SAR_Eukaryotes SAR_Eukaryotes 46.6 7.56e-4   NR MES1913795.1 1215613 g30028 i0 48.7 0.629032258064516 39 19 62.9 1 20 136 2 39 MES1913795.1 hypothetical protein [Cercozoa sp. M6MM] diamond 117 46.6 1 Eukaryota Sar   Cercozoa         Cercozoa sp. M6MM

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;