RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

35 rows where analysis = "diamond", bioproject = "PRJNA505329" and tax_clade = "Embryophyta"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Embryophyta · 35 ✖

bioproject 1

  • PRJNA505329 · 35 ✖

analysis 1

  • diamond · 35 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6861284 6861284 PRJNA505329_P_NODE_39406_length_173_cov_1.556452_g38935_i0 PRJNA505329 39406 173 1.556452 2.69266196 Magnoliopsida 3398 Plants Plants 92 6.23e-20   NR XP_039129088.1 55577 g38935 i0 75 16.5086705202312 56 14 97.1 0 2 169 639 694 XP_039129088.1 uncharacterized protein LOC120265278 [Dioscorea cayenensis subsp. rotundata] diamond 2856 92.8 0.991379310344828 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Dioscoreales Dioscoreaceae Dioscorea Dioscorea cayenensis
10687216 10687216 PRJNA505329_P_NODE_38809_length_174_cov_1.240000_g38338_i0 PRJNA505329 38809 174 1.24 2.1576 Castanea mollissima 60419 Plants Plants 104 3.07e-27   NR KAF3945936.1 60419 g38338 i0 94.6 0.96551724137931 56 3 96.6 0 3 170 5 60 KAF3945936.1 hypothetical protein CMV_027738, partial [Castanea mollissima] diamond 168 104 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Fagales Fagaceae Castanea Castanea mollissima
20885487 20885487 PRJNA505329_P_NODE_36537_length_177_cov_2.398438_g36066_i0 PRJNA505329 36537 177 2.398438 4.24523526 Eukaryota 2759 Plants Plants 68.2 8.92e-13   NR XBJ09944.1 4565 g36066 i0 68.9 3.71186440677966 45 14 76.3 0 140 6 1 45 XBJ09944.1 hypothetical protein VPH35_014921 [Triticum aestivum] diamond 657 68.6 0.994169096209913 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Triticum Triticum aestivum
26665340 26665340 PRJNA505329_P_NODE_52381_length_153_cov_2.673077_g51910_i0 PRJNA505329 52381 153 2.673077 4.08980781 Citrus sinensis 2711 Plants Plants 41.2 0.0381   NR KAH9771317.1 2711 g51910 i0 67.7 0.607843137254902 31 10 60.8 0 151 59 182 212 KAH9771317.1 ATP synthase subunit alpha [Citrus sinensis] diamond 93 41.2 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Sapindales Rutaceae Citrus Citrus sinensis
27139929 27139929 PRJNA505329_P_NODE_15722_length_233_cov_2.565217_g15251_i0 PRJNA505329 15722 233 2.565217 5.97695561 Sphagnum jensenii 128206 Plants Plants 52.8 9.68e-6   NR CAK9249687.1 128206 g15251 i0 75.9 1.86695278969957 29 7 37.3 0 91 5 864 892 CAK9249687.1 unnamed protein product [Sphagnum jensenii] diamond 435 52.8 1 Eukaryota Embryophyta Viridiplantae Streptophyta Sphagnopsida Sphagnales Sphagnaceae Sphagnum Sphagnum jensenii
27171696 27171696 PRJNA505329_P_NODE_42402_length_169_cov_0.866667_g41931_i0 PRJNA505329 42402 169 0.866667 1.46466723 Shorea laevis 152420 Plants Plants 82.8 1.9e-18   NR GLT70753.1 152420 g41931 i0 72.2 0.958579881656805 54 15 95.9 0 166 5 30 83 GLT70753.1 hypothetical protein SLA2020_428130 [Shorea laevis] diamond 162 82.8 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Malvales Dipterocarpaceae Shorea Shorea laevis
27393311 27393311 PRJNA505329_P_NODE_30863_length_186_cov_1.496350_g30392_i0 PRJNA505329 30863 186 1.49635 2.783211 Triticum urartu 4572 Plants Plants 69.7 5.57e-12   NR EMS53188.1 4572 g30392 i0 60.9 0.741935483870968 46 18 74.2 0 4 141 1464 1509 EMS53188.1 ABC transporter B family member 20 [Triticum urartu] diamond 138 69.7 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Triticum Triticum urartu
27709345 27709345 PRJNA505329_P_NODE_50164_length_162_cov_0.920354_g49693_i0 PRJNA505329 50164 162 0.920354 1.49097348 Tetracentron sinense 13715 Plants Plants 74.7 6.46e-14   NR KAF8398917.1 13715 g49693 i0 80 1.88888888888889 50 10 92.6 0 155 6 1 50 KAF8398917.1 hypothetical protein HHK36_014782 [Tetracentron sinense] diamond 306 74.7 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Trochodendrales Trochodendraceae Tetracentron Tetracentron sinense
27929911 27929911 PRJNA505329_P_NODE_10265_length_233_cov_4.347826_g9794_i0 PRJNA505329 10265 233 4.347826 10.13043458 Cinnamomum micranthum f. kanehirae 337451 Plants Plants 65.9 2.31e-10   NR RWR97052.1 337451 g9794 i0 93.9 0.424892703862661 33 2 42.5 0 4 102 152 184 RWR97052.1 hypothetical protein CKAN_02646200 [Cinnamomum micranthum f. kanehirae] diamond 99 65.9 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Laurales Lauraceae Cinnamomum Cinnamomum micranthum
28119285 28119285 PRJNA505329_P_NODE_40365_length_171_cov_2.516393_g39894_i0 PRJNA505329 40365 171 2.516393 4.30303203 Genlisea aurea 192259 Plants Plants 72.8 3.4e-13   NR EPS57986.1 192259 g39894 i0 69.1 0.964912280701754 55 17 96.5 0 6 170 56 110 EPS57986.1 hypothetical protein M569_16831, partial [Genlisea aurea] diamond 165 72.8 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Lamiales Lentibulariaceae Genlisea Genlisea aurea
28308890 28308890 PRJNA505329_P_NODE_43226_length_168_cov_0.873950_g42755_i0 PRJNA505329 43226 168 0.87395 1.468236 Shorea laevis 152420 Plants Plants 89 4.97e-19   NR GLT60838.1 152420 g42755 i0 88.9 0.964285714285714 54 6 96.4 0 167 6 245 298 GLT60838.1 hypothetical protein SLA2020_335840 [Shorea laevis] diamond 162 89 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Malvales Dipterocarpaceae Shorea Shorea laevis
28355734 28355734 PRJNA505329_P_NODE_30886_length_186_cov_1.496350_g30415_i0 PRJNA505329 30886 186 1.49635 2.783211 root 1 Root_unresolved Root_unresolved 77 1.4e-14   NR XP_003559345.1 15368 g30415 i0 55.9 22.2258064516129 59 23 95.2 1 3 179 328 383 XP_003559345.1 probable glutamate carboxypeptidase PLA3 isoform X2 [Brachypodium distachyon] diamond 4134 77.4 0.994832041343669 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Brachypodium Brachypodium distachyon
28656212 28656212 PRJNA505329_P_NODE_28567_length_189_cov_2.200000_g28096_i0 PRJNA505329 28567 189 2.2 4.158 Lolium multiflorum 4521 Plants Plants 129 6.73e-33   NR KAK1678999.1 4521 g28096 i0 100 40.6349206349206 61 0 96.8 0 185 3 292 352 KAK1678999.1 hypothetical protein QYE76_039847 [Lolium multiflorum] diamond 7680 129 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Lolium Lolium multiflorum
28860922 28860922 PRJNA505329_P_NODE_46528_length_165_cov_0.896552_g46057_i0 PRJNA505329 46528 165 0.896552 1.4793108 Magnoliopsida 3398 Plants Plants 100 4.4899999999999997e-23   NR XP_059452251.1 13451 g46057 i0 79.2 13.4909090909091 53 11 96.4 0 160 2 91 143 XP_059452251.1 pectate lyase-like [Corylus avellana] diamond 2226 101 0.99009900990099 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Fagales Betulaceae Corylus Corylus avellana
28987544 28987544 PRJNA505329_P_NODE_46788_length_165_cov_0.896552_g46317_i0 PRJNA505329 46788 165 0.896552 1.4793108 Poaceae 4479 Plants Plants 84 1.24e-17   NR XP_044332637.1 4565 g46317 i0 81.5 5.89090909090909 54 10 98.2 0 4 165 206 259 XP_044332637.1 probable F-box protein At2g36090 [Triticum aestivum] diamond 972 84 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Triticum Triticum aestivum
29161546 29161546 PRJNA505329_P_NODE_45949_length_165_cov_2.646552_g45478_i0 PRJNA505329 45949 165 2.646552 4.3668108 Hordeum vulgare 4513 Plants Plants 54.3 1.03e-6   NR KAI5000979.1 4513 g45478 i0 40.7 0.981818181818182 54 32 98.2 0 4 165 173 226 KAI5000979.1 hypothetical protein ZWY2020_010938 [Hordeum vulgare] diamond 162 54.3 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Hordeum Hordeum vulgare
29287493 29287493 PRJNA505329_P_NODE_15129_length_233_cov_2.668478_g14658_i0 PRJNA505329 15129 233 2.668478 6.21755374 Lactuca sativa 4236 Plants Plants 58.2 1.23e-7   NR KAJ0218693.1 4236 g14658 i0 81.8 0.424892703862661 33 6 42.5 0 100 2 1908 1940 KAJ0218693.1 hypothetical protein LSAT_V11C300155220 [Lactuca sativa] diamond 99 58.2 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Asterales Asteraceae Lactuca Lactuca sativa
29350816 29350816 PRJNA505329_P_NODE_32709_length_183_cov_2.283582_g32238_i0 PRJNA505329 32709 183 2.283582 4.17895506 Lactuca sativa 4236 Plants Plants 44.3 0.00474   NR KAJ0224335.1 4236 g32238 i0 90 0.622950819672131 20 2 32.8 0 169 110 534 553 KAJ0224335.1 hypothetical protein LSAT_V11C100008830 [Lactuca sativa] diamond 114 44.3 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Asterales Asteraceae Lactuca Lactuca sativa
29413798 29413798 PRJNA505329_P_NODE_32769_length_183_cov_1.985075_g32298_i0 PRJNA505329 32769 183 1.985075 3.63268725 Papaver atlanticum 357466 Plants Plants 54.3 1.36e-6   NR KAI3837642.1 357466 g32298 i0 49.2 0.967213114754098 59 30 96.7 0 5 181 135 193 KAI3837642.1 hypothetical protein MKW98_027001 [Papaver atlanticum] diamond 177 54.3 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Ranunculales Papaveraceae Papaver Papaver atlanticum
30235038 30235038 PRJNA505329_P_NODE_51212_length_158_cov_2.816514_g50741_i0 PRJNA505329 51212 158 2.816514 4.45009212 Aegilops tauschii subsp. strangulata 200361 Plants Plants 56.6 1.48e-7   NR XP_040245306.1 200361 g50741 i0 60 3.0379746835443 40 16 75.9 0 32 151 241 280 XP_040245306.1 uncharacterized protein LOC120964586 [Aegilops tauschii subsp. strangulata] diamond 480 56.6 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Aegilops Aegilops tauschii
30298707 30298707 PRJNA505329_P_NODE_26492_length_192_cov_2.146853_g26021_i0 PRJNA505329 26492 192 2.146853 4.12195776 Triticum aestivum 4565 Plants Plants 47 6.07e-4   NR BDI54638.1 4565 g26021 i0 56.4 0.609375 39 16 59.4 1 20 133 1755 1793 BDI54638.1 retrotransposon protein, putative, unclassified [Triticum aestivum] diamond 117 47 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Triticum Triticum aestivum
30677232 30677232 PRJNA505329_P_NODE_19453_length_201_cov_5.592105_g18982_i0 PRJNA505329 19453 201 5.592105 11.24013105 Vicia villosa 3911 Plants Plants 60.8 8.83e-9   NR XP_058784316.1 3911 g18982 i0 71.8 0.582089552238806 39 11 58.2 0 4 120 232 270 XP_058784316.1 uncharacterized protein LOC131659095 [Vicia villosa] diamond 117 60.8 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Fabales Fabaceae Vicia Vicia villosa
30803747 30803747 PRJNA505329_P_NODE_32794_length_183_cov_1.552239_g32323_i0 PRJNA505329 32794 183 1.552239 2.84059737 Dipteronia dyeriana 168575 Plants Plants 40 0.0263   NR KAK2641498.1 168575 g32323 i0 77.3 0.360655737704918 22 5 36.1 0 77 12 8 29 KAK2641498.1 hypothetical protein Ddye_023261 [Dipteronia dyeriana] diamond 66 40 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Sapindales Sapindaceae Dipteronia Dipteronia dyeriana
30898714 30898714 PRJNA505329_P_NODE_44794_length_166_cov_3.076923_g44323_i0 PRJNA505329 44794 166 3.076923 5.10769218 Abeliophyllum distichum 126358 Plants Plants 41.2 0.0368   NR KAL2453578.1 126358 g44323 i0 51.2 0.77710843373494 43 19 77.7 1 135 7 51 91 KAL2453578.1 Uncharacterized protein Adt_48919 [Abeliophyllum distichum] diamond 129 41.2 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Lamiales Oleaceae Abeliophyllum Abeliophyllum distichum
31150902 31150902 PRJNA505329_P_NODE_50375_length_161_cov_2.750000_g49904_i0 PRJNA505329 50375 161 2.75 4.4275 Brachypodium distachyon 15368 Plants Plants 50.8 4.97e-6   NR KQK23742.1 15368 g49904 i0 66.7 0.614906832298137 33 11 61.5 0 57 155 104 136 KQK23742.1 hypothetical protein BRADI_1g75795v3 [Brachypodium distachyon] diamond 99 50.8 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Brachypodium Brachypodium distachyon
31499349 31499349 PRJNA505329_P_NODE_41596_length_169_cov_2.550000_g41125_i0 PRJNA505329 41596 169 2.55 4.3095 Tanacetum cinerariifolium 118510 Plants Plants 41.2 0.0499   NR GEU30309.1 118510 g41125 i0 61.8 0.603550295857988 34 13 60.4 0 105 4 240 273 GEU30309.1 reverse transcriptase domain-containing protein [Tanacetum cinerariifolium] diamond 102 41.2 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Asterales Asteraceae Tanacetum Tanacetum cinerariifolium
31594303 31594303 PRJNA505329_P_NODE_50656_length_160_cov_2.765766_g50185_i0 PRJNA505329 50656 160 2.765766 4.4252256 Shorea laevis 152420 Plants Plants 75.9 2.36e-14   NR GLT69444.1 152420 g50185 i0 69.2 0.975 52 16 97.5 0 3 158 283 334 GLT69444.1 hypothetical protein SLA2020_415930 [Shorea laevis] diamond 156 75.9 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Malvales Dipterocarpaceae Shorea Shorea laevis
31688897 31688897 PRJNA505329_P_NODE_40957_length_170_cov_2.537190_g40486_i0 PRJNA505329 40957 170 2.53719 4.313223 Papaver armeniacum 357465 Plants Plants 77.4 4.56e-15   NR KAI3894661.1 357465 g40486 i0 64.6 2.54117647058824 48 17 84.7 0 26 169 42 89 KAI3894661.1 hypothetical protein MKW92_002849 [Papaver armeniacum] diamond 432 77.4 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Ranunculales Papaveraceae Papaver Papaver armeniacum
31847018 31847018 PRJNA505329_P_NODE_27517_length_191_cov_1.443662_g27046_i0 PRJNA505329 27517 191 1.443662 2.75739442 Cichorium endivia 114280 Plants Plants 55.1 8.27e-7   NR KAI3483704.1 114280 g27046 i0 62.2 0.706806282722513 45 17 70.7 0 51 185 290 334 KAI3483704.1 hypothetical protein L1887_53434 [Cichorium endivia] diamond 135 55.1 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Asterales Asteraceae Cichorium Cichorium endivia
31941846 31941846 PRJNA505329_P_NODE_40097_length_172_cov_1.373984_g39626_i0 PRJNA505329 40097 172 1.373984 2.36325248 Citrus sinensis 2711 Plants Plants 56.2 1.43e-8   NR KDO47076.1 2711 g39626 i0 82.1 0.488372093023256 28 5 48.8 0 52 135 1 28 KDO47076.1 hypothetical protein CISIN_1g041379mg, partial [Citrus sinensis] diamond 84 56.2 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Sapindales Rutaceae Citrus Citrus sinensis
32052420 32052420 PRJNA505329_P_NODE_40798_length_170_cov_3.983471_g40327_i0 PRJNA505329 40798 170 3.983471 6.7719007 Poaceae 4479 Plants Plants 68.2 1.49e-11   NR XP_051201851.1 4522 g40327 i0 89.7 5.11764705882353 29 3 51.2 0 166 80 205 233 XP_051201851.1 uncharacterized protein LOC127315398 [Lolium perenne] diamond 870 68.2 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Lolium Lolium perenne
32337440 32337440 PRJNA505329_P_NODE_34719_length_180_cov_1.580153_g34248_i0 PRJNA505329 34719 180 1.580153 2.8442754 Juglandaceae 16714 Plants Plants 98.6 9.28e-25   NR KAG2689058.1 32201 g34248 i0 70.7 6.86666666666667 58 17 96.7 0 176 3 59 116 KAG2689058.1 hypothetical protein I3760_09G122900 [Carya illinoinensis] diamond 1236 99.4 0.991951710261569 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Fagales Juglandaceae Carya Carya illinoinensis
32480118 32480118 PRJNA505329_P_NODE_45479_length_166_cov_0.888889_g45008_i0 PRJNA505329 45479 166 0.888889 1.47555574 Heracleum sosnowskyi 360622 Plants Plants 55.5 4.14e-7   NR KAK1387443.1 360622 g45008 i0 57.4 5.85542168674699 54 23 97.6 0 3 164 993 1046 KAK1387443.1 hypothetical protein POM88_015621 [Heracleum sosnowskyi] diamond 972 55.5 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Apiales Apiaceae Heracleum Heracleum sosnowskyi
32511885 32511885 PRJNA505329_P_NODE_20539_length_201_cov_3.546053_g20068_i0 PRJNA505329 20539 201 3.546053 7.12756653 Arachis hypogaea 3818 Plants Plants 43.9 0.00818   NR QHO53653.1 3818 g20068 i0 67.7 0.925373134328358 31 10 46.3 0 101 9 387 417 QHO53653.1 uncharacterized protein DS421_2g49830 [Arachis hypogaea] diamond 186 43.9 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Fabales Fabaceae Arachis Arachis hypogaea
32527350 32527350 PRJNA505329_P_NODE_22659_length_200_cov_2.953642_g22188_i0 PRJNA505329 22659 200 2.953642 5.907284 Poaceae 4479 Plants Plants 58.5 1.9e-8   NR VAH69759.1 4567 g22188 i0 47.1 7.98 70 27 90 1 192 13 101 170 VAH69759.1 unnamed protein product [Triticum turgidum subsp. durum] diamond 1596 58.5 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Triticum Triticum turgidum

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;