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contig_metadata

20 rows where analysis = "diamond", bioproject = "PRJNA498309" and tax_phylum = "Verrucomicrobiota"

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tax_superkingdom 1

tax_phylum 1

  • Verrucomicrobiota · 20 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA498309 · 20 ✖

analysis 1

  • diamond · 20 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
15782708 15782708 PRJNA498309_P_NODE_109833_length_173_cov_1.698529_g107684_i0 PRJNA498309 109833 173 1.698529 2.93845517 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 95.1 2.95e-22   NR HOY60684.1 2026799 g107684 i0 81.8 4.76878612716763 55 10 95.4 0 2 166 52 106 HOY60684.1 TIGR00730 family Rossman fold protein [Verrucomicrobiota bacterium] diamond 825 95.1 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
26792286 26792286 PRJNA498309_P_NODE_39261_length_442_cov_8.743210_g37166_i0 PRJNA498309 39261 442 8.74321 38.6449882 Prosthecobacter sp. 1965333 Bacteria Bacteria 126 4.48e-31   NR HYF37212.1 1965333 g37166 i0 58 0.760180995475113 112 44 75.3 3 387 55 362 471 HYF37212.1 terminase family protein [Prosthecobacter sp.] diamond 336 126 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae Prosthecobacter Prosthecobacter sp.
26792288 26792288 PRJNA498309_P_NODE_4761_length_1530_cov_9.099799_g3735_i0 PRJNA498309 4761 1530 9.099799 139.2269247 Chthoniobacterales bacterium 2201154 Bacteria Bacteria 311 5.7900000000000005e-97   NR HEY4285092.1 2201154 g3735 i0 74.5 0.384313725490196 196 50 38.4 0 3 590 250 445 HEY4285092.1 DNA methyltransferase [Chthoniobacterales bacterium] diamond 588 311 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Spartobacteria Chthoniobacterales     Chthoniobacterales bacterium
26997433 26997433 PRJNA498309_P_NODE_19602_length_657_cov_6.604839_g17807_i0 PRJNA498309 19602 657 6.604839 43.39379223 Brevifollis 1383070 Bacteria Bacteria 234 2.83e-75   NR WP_146850614.1 748831 g17807 i0 71.8 1.44292237442922 163 45 74.4 1 529 41 1 162 WP_146850614.1 hypothetical protein [Brevifollis gellanilyticus] diamond 948 234 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae Brevifollis Brevifollis gellanilyticus
27077036 27077036 PRJNA498309_P_NODE_27682_length_544_cov_3.952663_g25717_i0 PRJNA498309 27682 544 3.952663 21.50248672 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 235 4.359999999999999e-74   NR PYM04037.1 2026799 g25717 i0 94.4 1.35661764705882 126 7 69.5 0 383 6 1 126 PYM04037.1 MAG: hypothetical protein DMF13_02355 [Verrucomicrobiota bacterium] diamond 738 235 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
27171659 27171659 PRJNA498309_P_NODE_8442_length_1059_cov_3.559687_g7113_i0 PRJNA498309 8442 1059 3.559687 37.69708533 Horticoccus sp. 23ND18S-11 3391832 Bacteria Bacteria 458 6.609999999999998e-157   NR WP_414660626.1 3391832 g7113 i0 83.2 0.773371104815864 273 46 77.3 0 239 1057 1 273 WP_414660626.1 MFS transporter [Horticoccus sp. 23ND18S-11] diamond 819 458 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Opitutales Opitutaceae Horticoccus Horticoccus sp. 23ND18S-11
27693022 27693022 PRJNA498309_P_NODE_43964_length_411_cov_6.716578_g41839_i0 PRJNA498309 43964 411 6.716578 27.60513558 Bacteria 2 Bacteria Bacteria 95.1 1.67e-21   NR MBV9130075.1 2026799 g41839 i0 49 3.52554744525547 100 51 73 0 371 72 52 151 MBV9130075.1 hypothetical protein [Verrucomicrobiota bacterium] diamond 1449 95.5 0.995811518324607 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
27709271 27709271 PRJNA498309_P_NODE_102624_length_188_cov_1.529801_g100475_i0 PRJNA498309 102624 188 1.529801 2.87602588 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 82.4 3.69e-17   NR MBS0628556.1 2026799 g100475 i0 69.1 2.60106382978723 55 17 87.8 0 167 3 197 251 MBS0628556.1 hypothetical protein [Verrucomicrobiota bacterium] diamond 489 82.4 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
27929872 27929872 PRJNA498309_P_NODE_45125_length_404_cov_5.874659_g42993_i0 PRJNA498309 45125 404 5.874659 23.73362236 Rariglobus sp. 2706526 Bacteria Bacteria 79.3 3.63e-14   NR MET0262465.1 2706526 g42993 i0 42.2 0.861386138613861 116 59 83.2 3 27 362 737 848 MET0262465.1 glycosyltransferase [Rariglobus sp.] diamond 348 79.3 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Opitutales Opitutaceae Rariglobus Rariglobus sp.
27993151 27993151 PRJNA498309_S_NODE_26645_length_344_cov_340.990291_g24477_i0 PRJNA498309 26645 344 340.990291 1173.00660104 Luteolibacter algae 454151 Bacteria Bacteria 165 2.41e-47   NR WP_386818584.1 454151 g24477 i0 80.4 1.62209302325581 92 18 80.2 0 300 25 80 171 WP_386818584.1 glycosyltransferase family 4 protein [Luteolibacter algae] diamond 558 165 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae Luteolibacter Luteolibacter algae
28435145 28435145 PRJNA498309_P_NODE_98406_length_198_cov_1.645963_g96257_i0 PRJNA498309 98406 198 1.645963 3.25900674 Chthoniobacterales bacterium 2201154 Bacteria Bacteria 52.4 7.86e-6   NR HEV3149135.1 2201154 g96257 i0 49 2.28787878787879 49 25 74.2 0 191 45 275 323 HEV3149135.1 ABC transporter permease [Chthoniobacterales bacterium] diamond 453 52.4 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Spartobacteria Chthoniobacterales     Chthoniobacterales bacterium
28529938 28529938 PRJNA498309_S_NODE_13687_length_631_cov_12.588926_g11764_i0 PRJNA498309 13687 631 12.588926 79.43612306 Verrucomicrobiia bacterium 2499141 Bacteria Bacteria 313 5.999999999999999e-103   NR HEX7860182.1 2499141 g11764 i0 90.1 1.62599049128368 171 17 81.3 0 98 610 1 171 HEX7860182.1 putative DNA modification/repair radical SAM protein [Verrucomicrobiia bacterium] diamond 1026 313 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia       Verrucomicrobiia bacterium
29192987 29192987 PRJNA498309_P_NODE_5729_length_1354_cov_9.129841_g3735_i1 PRJNA498309 5729 1354 9.129841 123.61804714 Chthoniobacterales bacterium 2201154 Bacteria Bacteria 311 9.06e-98   NR HEY4285092.1 2201154 g3735 i1 74.5 0.434268833087149 196 50 43.4 0 3 590 250 445 HEY4285092.1 DNA methyltransferase [Chthoniobacterales bacterium] diamond 588 311 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Spartobacteria Chthoniobacterales     Chthoniobacterales bacterium
29413763 29413763 PRJNA498309_P_NODE_95549_length_205_cov_1.785714_g93400_i0 PRJNA498309 95549 205 1.785714 3.6607137 Luteolibacter yonseiensis 1144680 Bacteria Bacteria 72.4 2.37e-13   NR WP_200350434.1 1144680 g93400 i0 55 1.71219512195122 60 26 86.3 1 26 202 13 72 WP_200350434.1 hypothetical protein [Luteolibacter yonseiensis] diamond 351 72.4 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae Luteolibacter Luteolibacter yonseiensis
29445190 29445190 PRJNA498309_P_NODE_21210_length_629_cov_5.839527_g19363_i0 PRJNA498309 21210 629 5.839527 36.730624829999996 Verrucomicrobiia bacterium 2499141 Bacteria Bacteria 261 3.51e-78   NR MEI6034466.1 2499141 g19363 i0 66.5 1.96502384737679 203 66 95.9 1 24 626 2 204 MEI6034466.1 Hsp70 family protein [Verrucomicrobiia bacterium] diamond 1236 261 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia       Verrucomicrobiia bacterium
29729355 29729355 PRJNA498309_S_NODE_5330_length_1259_cov_11.385621_g3946_i0 PRJNA498309 5330 1259 11.385621 143.34496839 Chthoniobacterales bacterium 2201154 Bacteria Bacteria 305 8.259999999999999e-96   NR HEY4285092.1 2201154 g3946 i0 76.6 0.438443208895949 184 43 43.8 0 26 577 262 445 HEY4285092.1 DNA methyltransferase [Chthoniobacterales bacterium] diamond 552 305 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Spartobacteria Chthoniobacterales     Chthoniobacterales bacterium
30234960 30234960 PRJNA498309_P_NODE_113292_length_166_cov_2.395349_g111143_i0 PRJNA498309 113292 166 2.395349 3.97627934 Chthoniobacterales bacterium 2201154 Bacteria Bacteria 72.4 2.53e-13   NR MCX7713875.1 2201154 g111143 i0 100 0.578313253012048 32 0 57.8 0 97 2 231 262 MCX7713875.1 endonuclease/exonuclease/phosphatase family protein [Chthoniobacterales bacterium] diamond 96 72.4 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Spartobacteria Chthoniobacterales     Chthoniobacterales bacterium
30740481 30740481 PRJNA498309_P_NODE_21074_length_631_cov_8.378788_g19229_i0 PRJNA498309 21074 631 8.378788 52.87015228 Verrucomicrobiia bacterium 2499141 Bacteria Bacteria 313 5.999999999999999e-103   NR HEX7860182.1 2499141 g19229 i0 90.1 1.62599049128368 171 17 81.3 0 98 610 1 171 HEX7860182.1 putative DNA modification/repair radical SAM protein [Verrucomicrobiia bacterium] diamond 1026 313 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia       Verrucomicrobiia bacterium
31277658 31277658 PRJNA498309_P_NODE_78835_length_254_cov_2.783410_g76686_i0 PRJNA498309 78835 254 2.78341 7.0698614 Verrucomicrobiia bacterium 2499141 Bacteria Bacteria 42.7 0.0432   NR HUA59632.1 2499141 g76686 i0 33.8 0.767716535433071 65 39 73.2 2 19 204 321 384 HUA59632.1 serine/threonine-protein kinase [Verrucomicrobiia bacterium] diamond 195 42.7 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia       Verrucomicrobiia bacterium
31324776 31324776 PRJNA498309_P_NODE_38775_length_446_cov_1.640587_g36696_i0 PRJNA498309 38775 446 1.640587 7.31701802 Terrimicrobium 1649503 Bacteria Bacteria 212 3.54e-65   NR HEY5770585.1 1965319 g36696 i0 74.1 1.8632286995515699 139 36 93.5 0 22 438 1 139 HEY5770585.1 DUF4126 domain-containing protein [Terrimicrobium sp.] diamond 831 214 0.990654205607477 Bacteria PVC group Pseudomonadati Verrucomicrobiota Terrimicrobiia Terrimicrobiales Terrimicrobiaceae Terrimicrobium Terrimicrobium sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;