contig_metadata
4 rows where analysis = "diamond", bioproject = "PRJNA498309" and tax_phylum = "Ciliophora"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 17058288 | 17058288 | PRJNA498309_P_NODE_52714_length_362_cov_3.467692_g50566_i0 | PRJNA498309 | 52714 | 362 | 3.467692 | 12.55304504 | Stylonychia lemnae | 5949 | SAR_Eukaryotes | SAR_Eukaryotes | 108 | 3.66e-27 | NR | CDW78764.1 | 5949 | g50566 | i0 | 81.3 | 2.13812154696133 | 64 | 12 | 53 | 0 | 19 | 210 | 93 | 156 | CDW78764.1 40s ribosomal protein s18 [Stylonychia lemnae] | diamond | 774 | 108 | 1 | Eukaryota | Sar | Ciliophora | Spirotrichea | Sporadotrichida | Oxytrichidae | Stylonychia | Stylonychia lemnae | ||
| 27282268 | 27282268 | PRJNA498309_P_NODE_113503_length_166_cov_1.496124_g111354_i0 | PRJNA498309 | 113503 | 166 | 1.496124 | 2.48356584 | Paramecium | 5884 | SAR_Eukaryotes | SAR_Eukaryotes | 89 | 6.61e-19 | NR | CAD8087091.1 | 5886 | g111354 | i0 | 73.1 | 3.75903614457831 | 52 | 14 | 94 | 0 | 3 | 158 | 1098 | 1149 | CAD8087091.1 unnamed protein product [Paramecium primaurelia] | diamond | 624 | 89 | 1 | Eukaryota | Sar | Ciliophora | Oligohymenophorea | Peniculida | Parameciidae | Paramecium | Paramecium primaurelia | ||
| 29634487 | 29634487 | PRJNA498309_S_NODE_21790_length_422_cov_3.485788_g19659_i0 | PRJNA498309 | 21790 | 422 | 3.485788 | 14.71002536 | Ichthyophthirius multifiliis | 5932 | SAR_Eukaryotes | SAR_Eukaryotes | 102 | 8.43e-25 | NR | XP_004024378.1 | 5932 | g19659 | i0 | 50.5 | 1.58530805687204 | 111 | 52 | 78.2 | 2 | 414 | 85 | 11 | 119 | XP_004024378.1 ribosomal protein, putative [Ichthyophthirius multifiliis] | diamond | 669 | 102 | 1 | Eukaryota | Sar | Ciliophora | Oligohymenophorea | Hymenostomatida | Ichthyophthirius | Ichthyophthirius multifiliis | |||
| 30266941 | 30266941 | PRJNA498309_P_NODE_47132_length_392_cov_4.140845_g44996_i0 | PRJNA498309 | 47132 | 392 | 4.140845 | 16.2321124 | Ichthyophthirius multifiliis | 5932 | SAR_Eukaryotes | SAR_Eukaryotes | 102 | 5.93e-25 | NR | XP_004024378.1 | 5932 | g44996 | i0 | 50.5 | 1.70663265306122 | 111 | 52 | 84.2 | 2 | 385 | 56 | 11 | 119 | XP_004024378.1 ribosomal protein, putative [Ichthyophthirius multifiliis] | diamond | 669 | 102 | 1 | Eukaryota | Sar | Ciliophora | Oligohymenophorea | Hymenostomatida | Ichthyophthirius | Ichthyophthirius multifiliis |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;