RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA498309" and tax_phylum = "Candidatus Vogeliibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Vogeliibacteriota · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA498309 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27803721 27803721 PRJNA498309_P_NODE_92904_length_212_cov_1.320000_g90755_i0 PRJNA498309 92904 212 1.32 2.7984 Candidatus Vogelbacteria bacterium CG1 2053638 Bacteria Bacteria 76.6 1.98e-15   NR PIR45245.1 1975045 g90755 i0 69.6 0.650943396226415 46 14 65.1 0 182 45 28 73 PIR45245.1 MAG: hypothetical protein COV10_00405 [Candidatus Vogelbacteria bacterium CG10_big_fil_rev_8_21_14_0_10_51_16] diamond 138 76.6 1 Bacteria Bacteria candidate phyla   Candidatus Vogeliibacteriota         Candidatus Vogelbacteria bacterium CG10_big_fil_rev_8_21_14_0_10_51_16
28940444 28940444 PRJNA498309_P_NODE_88408_length_224_cov_5.176471_g86259_i0 PRJNA498309 88408 224 5.176471 11.59529504 Candidatus Vogelbacteria bacterium 2053638 Bacteria Bacteria 81.3 1.68e-17   NR MBI2097316.1 2053638 g86259 i0 60.3 1.56696428571429 63 23 83 2 5 190 22 83 MBI2097316.1 hypothetical protein [Candidatus Vogelbacteria bacterium] diamond 351 81.3 1 Bacteria Bacteria candidate phyla   Candidatus Vogeliibacteriota         Candidatus Vogelbacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;