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contig_metadata

4 rows where analysis = "diamond", bioproject = "PRJNA498309" and tax_phylum = "Candidatus Bipolaricaulota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Bipolaricaulota · 4 ✖

tax_clade 1

bioproject 1

  • PRJNA498309 · 4 ✖

analysis 1

  • diamond · 4 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26902872 26902872 PRJNA498309_P_NODE_51441_length_369_cov_2.756024_g49294_i0 PRJNA498309 51441 369 2.756024 10.16972856 root 1 Root_unresolved Root_unresolved 119 1.02e-28   NR HDN19895.1 2053493 g49294 i0 57.3 7.22764227642276 96 41 78 0 304 17 177 272 HDN19895.1 DUF262 domain-containing protein [Candidatus Acetothermia bacterium] diamond 2667 120 0.991666666666667 Bacteria Bacteria candidate phyla   Candidatus Bipolaricaulota         Candidatus Acetothermia bacterium
27677563 27677563 PRJNA498309_P_NODE_15504_length_748_cov_11.052039_g13847_i0 PRJNA498309 15504 748 11.052039 82.66925172 Candidatus Bipolaricaulia bacterium 3121610 Bacteria Bacteria 322 4.709999999999997e-106   NR MFQ6117313.1 3121610 g13847 i0 69.3 1.72459893048128 215 65 86.2 1 82 726 2 215 MFQ6117313.1 acyl-CoA dehydrogenase family protein [Candidatus Bipolaricaulia bacterium] diamond 1290 322 1 Bacteria Bacteria candidate phyla   Candidatus Bipolaricaulota Candidatus Bipolaricaulia       Candidatus Bipolaricaulia bacterium
29982249 29982249 PRJNA498309_P_NODE_46431_length_396_cov_13.091922_g44296_i0 PRJNA498309 46431 396 13.091922 51.84401112 Candidatus Bipolaricaulota bacterium 2306012 Bacteria Bacteria 44.7 0.0378   NR MCD5415675.1 2306012 g44296 i0 83.3 0.181818181818182 24 4 18.2 0 378 307 389 412 MCD5415675.1 methylaspartate ammonia-lyase [Candidatus Bipolaricaulota bacterium] diamond 72 44.7 1 Bacteria Bacteria candidate phyla   Candidatus Bipolaricaulota         Candidatus Bipolaricaulota bacterium
32100159 32100159 PRJNA498309_P_NODE_49278_length_380_cov_6.661808_g47139_i0 PRJNA498309 49278 380 6.661808 25.3148704 Candidatus Acetothermia bacterium 2053493 Bacteria Bacteria 80.9 5.28e-15   NR MCI2429081.1 2053493 g47139 i0 60.3 0.536842105263158 68 27 53.7 0 225 22 74 141 MCI2429081.1 glycosyltransferase [Candidatus Acetothermia bacterium] diamond 204 80.9 1 Bacteria Bacteria candidate phyla   Candidatus Bipolaricaulota         Candidatus Acetothermia bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;