RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

22 rows where analysis = "diamond", bioproject = "PRJNA498309" and tax_clade = "Stenosarchaea group"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Stenosarchaea group · 22 ✖

bioproject 1

  • PRJNA498309 · 22 ✖

analysis 1

  • diamond · 22 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
23434575 23434575 PRJNA498309_S_NODE_27699_length_330_cov_2.755932_g25531_i0 PRJNA498309 27699 330 2.755932 9.0945756 Halalkalicoccus subterraneus 2675002 Archaea Archaea 146 1.17e-40   NR WP_245998556.1 2675002 g25531 i0 82 0.809090909090909 89 16 80.9 0 327 61 222 310 WP_245998556.1 transposase [Halalkalicoccus subterraneus] diamond 267 146 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halococcaceae Halalkalicoccus Halalkalicoccus subterraneus
26855780 26855780 PRJNA498309_S_NODE_20061_length_456_cov_59.503563_g17956_i0 PRJNA498309 20061 456 59.503563 271.33624728 Halalkalicoccus subterraneus 2675002 Archaea Archaea 80.5 4.18e-17   NR WP_162993962.1 2675002 g17956 i0 75.6 0.598684210526316 45 11 29.6 0 191 57 1 45 WP_162993962.1 DUF7563 family protein [Halalkalicoccus subterraneus] diamond 273 80.5 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halococcaceae Halalkalicoccus Halalkalicoccus subterraneus
27330060 27330060 PRJNA498309_S_NODE_41003_length_207_cov_1.982558_g38835_i0 PRJNA498309 41003 207 1.982558 4.10389506 Halalkalicoccus tibetensis 175632 Archaea Archaea 135 7.75e-37   NR WP_340602647.1 175632 g38835 i0 95.5 3.84057971014493 66 3 95.7 0 10 207 130 195 WP_340602647.1 zinc-dependent metalloprotease [Halalkalicoccus tibetensis] diamond 795 135 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halococcaceae Halalkalicoccus Halalkalicoccus tibetensis
27393282 27393282 PRJNA498309_S_NODE_28523_length_319_cov_2.433099_g26355_i0 PRJNA498309 28523 319 2.433099 7.76158581 Halalkalicoccus sp. 1973143 Archaea Archaea 129 1.35e-36   NR MCL7418433.1 1973143 g26355 i0 72.7 1.44827586206897 77 21 72.4 0 28 258 1 77 MCL7418433.1 hypothetical protein [Halalkalicoccus sp.] diamond 462 129 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halococcaceae Halalkalicoccus Halalkalicoccus sp.
27772216 27772216 PRJNA498309_P_NODE_94064_length_208_cov_29.953216_g91915_i0 PRJNA498309 94064 208 29.953216 62.30268928 Methanotrichaceae archaeon 2595067 Archaea Archaea 42 0.0315   NR MCJ7445187.1 2595067 g91915 i0 46.2 0.5625 39 21 56.3 0 117 1 107 145 MCJ7445187.1 imidazoleglycerol-phosphate dehydratase [Methanotrichaceae archaeon] diamond 117 42 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanotrichales Methanotrichaceae   Methanotrichaceae archaeon
28056087 28056087 PRJNA498309_S_NODE_54205_length_150_cov_3.182609_g52037_i0 PRJNA498309 54205 150 3.182609 4.7739135 Halococcus salifodinae 36738 Archaea Archaea 41.6 0.00724   NR WP_005042062.1 36738 g52037 i0 88.9 0.72 18 2 36 0 148 95 74 91 WP_005042062.1 hypothetical protein [Halococcus salifodinae] diamond 108 41.6 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halococcaceae Halococcus Halococcus salifodinae
28308810 28308810 PRJNA498309_P_NODE_122246_length_152_cov_1.017391_g120097_i0 PRJNA498309 122246 152 1.017391 1.54643432 Haloferacaceae archaeon 2080321 Archaea Archaea 65.9 7.44e-11   NR MFB6097346.1 2080321 g120097 i0 77.8 0.710526315789474 36 8 71.1 0 150 43 572 607 MFB6097346.1 thiamine pyrophosphate-binding protein [Haloferacaceae archaeon] diamond 108 65.9 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae   Haloferacaceae archaeon
28924003 28924003 PRJNA498309_S_NODE_26788_length_342_cov_56.557003_g24620_i0 PRJNA498309 26788 342 56.557003 193.42495026 Halobacteriales 2235 Archaea Archaea 69.3 1.14e-11   NR WP_227778749.1 1008152 g24620 i0 70.5 2.31578947368421 44 13 38.6 0 26 157 134 177 WP_227778749.1 helix-turn-helix domain-containing protein [Haladaptatus pallidirubidus] diamond 792 69.3 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haladaptataceae Haladaptatus Haladaptatus pallidirubidus
28924005 28924005 PRJNA498309_S_NODE_35288_length_247_cov_2.707547_g33120_i0 PRJNA498309 35288 247 2.707547 6.68764109 Natrialbaceae 1644061 Archaea Archaea 117 1.48e-29   NR WP_076147264.1 301967 g33120 i0 81.1 8.10121457489879 74 14 89.9 0 223 2 215 288 WP_076147264.1 KaiC domain-containing protein [Natrinema saccharevitans] diamond 2001 117 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natrialbaceae Natrinema Natrinema saccharevitans
29319031 29319031 PRJNA498309_P_NODE_100809_length_192_cov_1.948387_g98660_i0 PRJNA498309 100809 192 1.948387 3.74090304 Halalkalicoccus 332246 Archaea Archaea 125 5.26e-32   NR WP_332097912.1 332246 g98660 i0 88.9 0.984375 63 7 98.4 0 190 2 367 429 WP_332097912.1 MULTISPECIES: polysaccharide deacetylase family protein [Halalkalicoccus] diamond 189 125 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halococcaceae Halalkalicoccus  
29666058 29666058 PRJNA498309_P_NODE_72050_length_278_cov_2.112033_g69901_i0 PRJNA498309 72050 278 2.112033 5.87145174 Halococcus thailandensis 335952 Archaea Archaea 112 2.95e-29   NR WP_007736893.1 335952 g69901 i0 67.1 0.884892086330935 82 27 88.5 0 8 253 26 107 WP_007736893.1 hypothetical protein [Halococcus thailandensis] diamond 246 112 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halococcaceae Halococcus Halococcus thailandensis
29697565 29697565 PRJNA498309_P_NODE_32710_length_494_cov_4.844639_g30686_i0 PRJNA498309 32710 494 4.844639 23.93251666 Candidatus Nanohaloarchaea archaeon 2594798 Archaea Archaea 45.4 0.0496   NR MFB6209555.1 2594798 g30686 i0 27 0.965587044534413 159 93 88.7 8 489 52 148 296 MFB6209555.1 helicase C-terminal domain-containing protein [Candidatus Nanohaloarchaea archaeon] diamond 477 45.4 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Candidatus Nanohaloarchaea       Candidatus Nanohaloarchaea archaeon
30045306 30045306 PRJNA498309_P_NODE_74651_length_269_cov_1.487069_g72502_i0 PRJNA498309 74651 269 1.487069 4.00021561 Natronorarus salvus 3117733 Archaea Archaea 58.5 8.15e-8   NR WP_331235731.1 3117733 g72502 i0 80 0.33457249070632 30 6 33.5 0 91 2 1 30 WP_331235731.1 helix-turn-helix domain-containing protein [Natronorarus salvus] diamond 90 58.5 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halalkalicoccaceae Natronorarus Natronorarus salvus
30787650 30787650 PRJNA498309_P_NODE_74294_length_270_cov_2.210300_g72145_i0 PRJNA498309 74294 270 2.2103 5.96781 Halobacteriales 2235 Archaea Archaea 81.6 1.05e-15   NR WP_129113618.1 2071624 g72145 i0 48.1 3.51111111111111 81 42 90 0 251 9 481 561 WP_129113618.1 hydantoinase/oxoprolinase family protein [Halegenticoccus tardaugens] diamond 948 82 0.995121951219512 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Halegenticoccus Halegenticoccus tardaugens
30961814 30961814 PRJNA498309_S_NODE_30014_length_300_cov_787.618868_g27846_i0 PRJNA498309 30014 300 787.618868 2362.856604 Halococcus thailandensis 335952 Archaea Archaea 112 5.52e-29   NR WP_007736893.1 335952 g27846 i0 65.9 0.85 85 29 85 0 12 266 23 107 WP_007736893.1 hypothetical protein [Halococcus thailandensis] diamond 255 112 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halococcaceae Halococcus Halococcus thailandensis
30993383 30993383 PRJNA498309_P_NODE_83434_length_239_cov_28.183168_g81285_i0 PRJNA498309 83434 239 28.183168 67.35777152 Natrialba sp. SSL1 1869245 Archaea Archaea 130 3.41e-33   NR WP_071401651.1 1869245 g81285 i0 96.7 0.765690376569038 61 2 76.6 0 22 204 7 67 WP_071401651.1 heavy metal translocating P-type ATPase [Natrialba sp. SSL1] diamond 183 130 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natrialbaceae Natrialba Natrialba sp. SSL1
31594234 31594234 PRJNA498309_P_NODE_52696_length_362_cov_4.196923_g50548_i0 PRJNA498309 52696 362 4.196923 15.19286126 Methanofastidiosum sp. 2666341 Archaea Archaea 115 6.410000000000001e-27   NR MFA5559254.1 2666341 g50548 i0 80.6 1.11049723756906 67 13 55.5 0 208 8 120 186 MFA5559254.1 DNA polymerase III subunit alpha [Methanofastidiosum sp.] diamond 402 115 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Candidatus Methanofastidiosia Candidatus Methanofastidiosales Candidatus Methanofastidiosaceae Candidatus Methanofastidiosum Methanofastidiosum sp.
31641081 31641081 PRJNA498309_S_NODE_30016_length_300_cov_411.215094_g27848_i0 PRJNA498309 30016 300 411.215094 1233.645282 Halobacteriales 2235 Archaea Archaea 81.6 1.6e-15   NR WP_129113618.1 2071624 g27848 i0 48.1 3.95 81 42 81 0 279 37 481 561 WP_129113618.1 hydantoinase/oxoprolinase family protein [Halegenticoccus tardaugens] diamond 1185 82 0.995121951219512 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Halegenticoccus Halegenticoccus tardaugens
31910359 31910359 PRJNA498309_P_NODE_89917_length_220_cov_2.000000_g87768_i0 PRJNA498309 89917 220 2 4.4 Halocatena salina 2934340 Archaea Archaea 54.3 1.46e-6   NR WP_247995607.1 2934340 g87768 i0 67.6 0.504545454545455 37 12 50.5 0 35 145 181 217 WP_247995607.1 helix-turn-helix domain-containing protein [Halocatena salina] diamond 111 54.3 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natronomonadaceae Halocatena Halocatena salina
32416756 32416756 PRJNA498309_S_NODE_42639_length_198_cov_1.674847_g40471_i0 PRJNA498309 42639 198 1.674847 3.31619706 Halococcus salifodinae 36738 Archaea Archaea 78.6 4.01e-17   NR WP_005042062.1 36738 g40471 i0 68.5 1.59090909090909 54 17 81.8 0 9 170 3 56 WP_005042062.1 hypothetical protein [Halococcus salifodinae] diamond 315 78.6 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halococcaceae Halococcus Halococcus salifodinae
32732351 32732351 PRJNA498309_S_NODE_28240_length_322_cov_251.073171_g26072_i0 PRJNA498309 28240 322 251.073171 808.45561062 Natronorarus salvus 3117733 Archaea Archaea 70.5 5.46e-12   NR WP_331235731.1 3117733 g26072 i0 78.4 0.34472049689441 37 8 34.5 0 120 10 1 37 WP_331235731.1 helix-turn-helix domain-containing protein [Natronorarus salvus] diamond 111 70.5 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halalkalicoccaceae Natronorarus Natronorarus salvus
32841993 32841993 PRJNA498309_S_NODE_27760_length_329_cov_3.098639_g25592_i0 PRJNA498309 27760 329 3.098639 10.19452231 Natronomonas 63743 Archaea Archaea 171 3.83e-49   NR WP_268105892.1 1046043 g25592 i0 76.9 1.89665653495441 104 24 94.8 0 314 3 165 268 WP_268105892.1 acyl-CoA dehydrogenase family protein [Natronomonas gomsonensis] diamond 624 171 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natronomonadaceae Natronomonas Natronomonas gomsonensis

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;