RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA498309" and tax_clade = "Discoba"

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tax_phylum 2

tax_superkingdom 1

tax_clade 1

  • Discoba · 2 ✖

bioproject 1

  • PRJNA498309 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
15783009 15783009 PRJNA498309_P_NODE_20073_length_648_cov_13.119476_g18259_i0 PRJNA498309 20073 648 13.119476 85.01420448 Acrasis kona 1008807 Heterolobosea other_Eukaryota 109 1.41e-24   NR KAL0478636.1 1008807 g18259 i0 51.6 1.13888888888889 122 55 55.6 3 48 407 169 288 KAL0478636.1 hypothetical protein AKO1_005035 [Acrasis kona] diamond 738 109 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona
32794923 32794923 PRJNA498309_P_NODE_88400_length_224_cov_6.085561_g86251_i0 PRJNA498309 88400 224 6.085561 13.63165664 Leptomonas pyrrhocoris 157538 Euglenozoa other_Eukaryota 68.6 1.59e-11   NR XP_015654710.1 157538 g86251 i0 64.1 1.04464285714286 39 13 52.2 1 208 92 275 312 XP_015654710.1 putative mitochondrial hypothetical protein [Leptomonas pyrrhocoris] diamond 234 68.6 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leptomonas Leptomonas pyrrhocoris

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;