RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA495917" and tax_phylum = "Planctomycetota"

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tax_superkingdom 1

tax_phylum 1

  • Planctomycetota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA495917 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30866808 30866808 PRJNA495917_S_NODE_14094_length_157_cov_2.934426_g13900_i0 PRJNA495917 14094 157 2.934426 4.60704882 Planctomycetota bacterium 2026780 Bacteria Bacteria 43.9 0.00452   NR MBM4009064.1 2026780 g13900 i0 37.5 1.52866242038217 40 22 70.7 1 2 112 137 176 MBM4009064.1 DMT family transporter [Planctomycetota bacterium] diamond 240 43.9 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium
32527339 32527339 PRJNA495917_S_NODE_4539_length_234_cov_2.432161_g4345_i0 PRJNA495917 4539 234 2.432161 5.69125674 Bacteria 2 Bacteria Bacteria 109 9.31e-26   NR MFK7818047.1 2026779 g4345 i0 69.7 3.92307692307692 76 21 96.2 2 234 10 1377 1451 MFK7818047.1 Calx-beta domain-containing protein [Planctomycetaceae bacterium] diamond 918 109 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Planctomycetales Planctomycetaceae   Planctomycetaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;