RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA495917" and tax_kingdom = "Orthornavirae"

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tax_phylum 2

tax_superkingdom 1

tax_kingdom 1

  • Orthornavirae · 3 ✖

bioproject 1

  • PRJNA495917 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26601935 26601935 PRJNA495917_S_NODE_3361_length_267_cov_3.685345_g3167_i0 PRJNA495917 3361 267 3.685345 9.83987115 Aegean partiti-like virus 2912685 Viruses Viruses 79 8.73e-15   NR DAZ87271.1 2912685 g3167 i0 40.2 0.921348314606742 82 49 92.1 0 14 259 403 484 DAZ87271.1 TPA_asm: RNA-dependent polymerase [Aegean partiti-like virus] diamond 246 79 1 Viruses   Orthornavirae Pisuviricota Duplopiviricetes Durnavirales Partitiviridae   Aegean partiti-like virus
27803672 27803672 PRJNA495917_S_NODE_184_length_982_cov_3.552270_g108_i0 PRJNA495917 184 982 3.55227 34.8832914 Aegean partiti-like virus 2912685 Viruses Viruses 182 2.82e-49   NR DAZ87271.1 2912685 g108 i0 32.6 1.020366598778 334 213 99.9 5 982 2 76 404 DAZ87271.1 TPA_asm: RNA-dependent polymerase [Aegean partiti-like virus] diamond 1002 182 1 Viruses   Orthornavirae Pisuviricota Duplopiviricetes Durnavirales Partitiviridae   Aegean partiti-like virus
28435097 28435097 PRJNA495917_S_NODE_3526_length_261_cov_4.911504_g3332_i0 PRJNA495917 3526 261 4.911504 12.81902544 dengue virus type 4 11070 Viruses Viruses 65.5 4.71e-10   NR WGD01105.1 11070 g3332 i0 96.7 0.67816091954023 30 1 34.5 0 224 135 2417 2446 WGD01105.1 polyprotein [dengue virus type 4] diamond 177 65.5 1 Viruses   Orthornavirae Kitrinoviricota Flasuviricetes Amarillovirales Flaviviridae Orthoflavivirus Orthoflavivirus denguei

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;