RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA494251" and tax_phylum = "Negarnaviricota"

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tax_superkingdom 1

tax_phylum 1

  • Negarnaviricota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA494251 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30456426 30456426 PRJNA494251_P_NODE_25793_length_287_cov_2.728972_g25479_i0 PRJNA494251 25793 287 2.728972 7.83214964 brine shrimp yue-like virus 9 2900461 Viruses Viruses 57.4 4.66e-7   NR UNI74195.1 2900461 g25479 i0 65.2 0.480836236933798 46 14 48.1 1 267 130 2347 2390 UNI74195.1 MAG: RNA-dependent RNA polymerase [brine shrimp yue-like virus 9] diamond 138 57.4 1 Viruses   Orthornavirae Negarnaviricota Yunchangviricetes Goujianvirales Yueviridae   brine shrimp yue-like virus 9
30629459 30629459 PRJNA494251_P_NODE_24053_length_295_cov_1.963964_g23739_i0 PRJNA494251 24053 295 1.963964 5.7936938 Chuvivirus 2842604 Viruses Viruses 135 3.0799999999999996e-35   NR WET19887.1 2842604 g23739 i0 63.3 1.99322033898305 98 36 99.7 0 2 295 298 395 WET19887.1 MAG: nucleoprotein [Freshwater turtle neural virus 1] diamond 588 135 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Jingchuvirales Chuviridae Chuvivirus Chuvivirus
30835152 30835152 PRJNA494251_P_NODE_15594_length_352_cov_1.100358_g15281_i0 PRJNA494251 15594 352 1.100358 3.87326016 brine shrimp arlivirus 5 2900380 Viruses Viruses 102 4.309999999999999e-23   NR UNI74090.1 2900380 g15281 i0 70 0.596590909090909 70 21 59.7 0 351 142 337 406 UNI74090.1 MAG: hypothetical protein [brine shrimp arlivirus 5] diamond 210 102 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Lispiviridae Artemvirus Artemvirus bsafivalis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;