RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA494251" and tax_phylum = "Gastrotricha"

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tax_superkingdom 1

tax_phylum 1

  • Gastrotricha · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA494251 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28498213 28498213 PRJNA494251_P_NODE_19087_length_323_cov_3.436000_g18773_i0 PRJNA494251 19087 323 3.436 11.09828 Litigonotus ghinii 3104745 Gastrotricha other_Eukaryota 134 1.07e-36   NR XCN99738.1 3104745 g18773 i0 69.8 0.984520123839009 106 32 98.5 0 321 4 17 122 XCN99738.1 ATP synthase F0 subunit 6 [Litigonotus ghinii] diamond 318 134 1 Eukaryota Opisthokonta Metazoa Gastrotricha   Chaetonotida Chaetonotidae Litigonotus Litigonotus ghinii
29413647 29413647 PRJNA494251_P_NODE_35949_length_253_cov_1.711111_g35635_i0 PRJNA494251 35949 253 1.711111 4.32911083 Lepidodermella squamata 1194616 Gastrotricha other_Eukaryota 118 2.3499999999999998e-32   NR YP_009136578.1 1194616 g35635 i0 88.1 0.794466403162055 67 8 79.4 0 222 22 8 74 YP_009136578.1 NADH dehydrogenase subunit 3 [Lepidodermella squamata] diamond 201 118 1 Eukaryota Opisthokonta Metazoa Gastrotricha   Chaetonotida Chaetonotidae Lepidodermella Lepidodermella squamata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;