contig_metadata
15 rows where analysis = "diamond", bioproject = "PRJNA494251" and tax_phylum = "Chlamydiota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 14503804 | 14503804 | PRJNA494251_P_NODE_10172_length_420_cov_1.069164_g9866_i0 | PRJNA494251 | 10172 | 420 | 1.069164 | 4.4904888 | Rhabdochlamydiaceae bacterium | 2047756 | Bacteria | Bacteria | 127 | 4.12e-35 | NR | HNA62975.1 | 2047756 | g9866 | i0 | 95.5 | 0.471428571428571 | 66 | 3 | 47.1 | 0 | 38 | 235 | 4 | 69 | HNA62975.1 hypothetical protein [Rhabdochlamydiaceae bacterium] | diamond | 198 | 127 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Candidatus Rhabdochlamydiaceae | Rhabdochlamydiaceae bacterium | ||
| 15777756 | 15777756 | PRJNA494251_P_NODE_1633_length_925_cov_1.500000_g1415_i0 | PRJNA494251 | 1633 | 925 | 1.5 | 13.875 | Bacteria | 2 | Bacteria | Bacteria | 482 | 6.849999999999999e-164 | NR | MBA3815839.1 | 2052176 | g1415 | i0 | 74.8 | 57.6648648648649 | 306 | 70 | 99.2 | 2 | 2 | 919 | 187 | 485 | MBA3815839.1 catalase [Parachlamydiaceae bacterium] | diamond | 53340 | 482 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | Parachlamydiaceae bacterium | ||
| 18326728 | 18326728 | PRJNA494251_P_NODE_12175_length_389_cov_2.813291_g11868_i0 | PRJNA494251 | 12175 | 389 | 2.813291 | 10.94370199 | Bacteria | 2 | Bacteria | Bacteria | 228 | 4.37e-71 | NR | MBN1915003.1 | 2052178 | g11868 | i0 | 83.6 | 63.4087403598972 | 128 | 21 | 98.7 | 0 | 387 | 4 | 10 | 137 | MBN1915003.1 elongation factor Tu [Parachlamydiales bacterium] | diamond | 24666 | 228 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiales bacterium | |||
| 22151971 | 22151971 | PRJNA494251_P_NODE_35858_length_253_cov_2.388889_g35544_i0 | PRJNA494251 | 35858 | 253 | 2.388889 | 6.04388917 | root | 1 | Root_unresolved | Root_unresolved | 124 | 2.19e-31 | NR | WP_032125010.1 | 389348 | g35544 | i0 | 83.1 | 13.5059288537549 | 71 | 12 | 84.2 | 0 | 38 | 250 | 190 | 260 | WP_032125010.1 asparagine--tRNA ligase [Candidatus Protochlamydia naegleriophila] | diamond | 3417 | 125 | 0.992 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | Candidatus Protochlamydia | Candidatus Protochlamydia naegleriophila | |
| 26982046 | 26982046 | PRJNA494251_P_NODE_46442_length_243_cov_1.600000_g46128_i0 | PRJNA494251 | 46442 | 243 | 1.6 | 3.888 | Waddlia chondrophila | 71667 | Bacteria | Bacteria | 45.8 | 0.00307 | NR | WP_013181240.1 | 71667 | g46128 | i0 | 38.2 | 0.679012345679012 | 55 | 34 | 67.9 | 0 | 177 | 13 | 394 | 448 | WP_013181240.1 hydantoinase/oxoprolinase N-terminal domain-containing protein [Waddlia chondrophila] | diamond | 165 | 45.8 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Waddliaceae | Waddlia | Waddlia chondrophila | |
| 27013605 | 27013605 | PRJNA494251_P_NODE_51002_length_233_cov_3.150000_g50688_i0 | PRJNA494251 | 51002 | 233 | 3.15 | 7.3395 | Chlamydiales bacterium | 2047757 | Bacteria | Bacteria | 79.7 | 2.04e-17 | NR | HSW72455.1 | 2047757 | g50688 | i0 | 51.3 | 3.79828326180258 | 76 | 36 | 97.9 | 1 | 1 | 228 | 18 | 92 | HSW72455.1 transaldolase family protein [Chlamydiales bacterium] | diamond | 885 | 79.7 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Chlamydiales | Chlamydiales bacterium | |||
| 28687809 | 28687809 | PRJNA494251_P_NODE_28007_length_279_cov_1.475728_g27693_i0 | PRJNA494251 | 28007 | 279 | 1.475728 | 4.11728112 | Parachlamydia sp. AcF125 | 2795736 | Bacteria | Bacteria | 49.7 | 2.14e-4 | NR | WP_213157080.1 | 2795736 | g27693 | i0 | 37.7 | 0.741935483870968 | 69 | 42 | 74.2 | 1 | 63 | 269 | 613 | 680 | WP_213157080.1 ankyrin repeat domain-containing protein [Parachlamydia sp. AcF125] | diamond | 207 | 49.7 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | Parachlamydia | Parachlamydia sp. AcF125 | |
| 28703189 | 28703189 | PRJNA494251_P_NODE_26647_length_284_cov_1.459716_g26333_i0 | PRJNA494251 | 26647 | 284 | 1.459716 | 4.14559344 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 115 | 1.11e-27 | NR | WP_013182152.1 | 71667 | g26333 | i0 | 61.7 | 2.95774647887324 | 94 | 36 | 99.3 | 0 | 283 | 2 | 350 | 443 | WP_013182152.1 diphosphate--fructose-6-phosphate 1-phosphotransferase [Waddlia chondrophila] | diamond | 840 | 115 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Waddliaceae | Waddlia | Waddlia chondrophila | |
| 28908279 | 28908279 | PRJNA494251_P_NODE_44748_length_245_cov_0.895349_g44434_i0 | PRJNA494251 | 44748 | 245 | 0.895349 | 2.19360505 | Chlamydiales bacterium | 2047757 | Bacteria | Bacteria | 153 | 4.8099999999999996e-42 | NR | HSX13610.1 | 2047757 | g44434 | i0 | 85 | 0.979591836734694 | 80 | 12 | 98 | 0 | 3 | 242 | 373 | 452 | HSX13610.1 carboxypeptidase M32 [Chlamydiales bacterium] | diamond | 240 | 153 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Chlamydiales | Chlamydiales bacterium | |||
| 29129825 | 29129825 | PRJNA494251_P_NODE_8029_length_463_cov_5.061538_g7726_i0 | PRJNA494251 | 8029 | 463 | 5.061538 | 23.43492094 | Chlamydiales bacterium | 2047757 | Bacteria | Bacteria | 135 | 2.36e-37 | NR | MCP5470420.1 | 2047757 | g7726 | i0 | 57.4 | 0.881209503239741 | 136 | 58 | 88.1 | 0 | 462 | 55 | 18 | 153 | MCP5470420.1 ribosomal protein L24e family protein [Chlamydiales bacterium] | diamond | 408 | 135 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Chlamydiales | Chlamydiales bacterium | |||
| 29224558 | 29224558 | PRJNA494251_P_NODE_26069_length_286_cov_2.084507_g25755_i0 | PRJNA494251 | 26069 | 286 | 2.084507 | 5.96169002 | Chlamydiales bacterium | 2047757 | Bacteria | Bacteria | 52 | 3.22e-5 | NR | MBN9377481.1 | 2047757 | g25755 | i0 | 32.4 | 1.06993006993007 | 102 | 53 | 92.3 | 3 | 282 | 19 | 140 | 239 | MBN9377481.1 hypothetical protein [Chlamydiales bacterium] | diamond | 306 | 52 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Chlamydiales | Chlamydiales bacterium | |||
| 29760915 | 29760915 | PRJNA494251_P_NODE_2251_length_798_cov_3.219310_g2006_i0 | PRJNA494251 | 2251 | 798 | 3.21931 | 25.6900938 | Simkania sp. | 34094 | Bacteria | Bacteria | 234 | 3.53e-73 | NR | MCB1084310.1 | 34094 | g2006 | i0 | 62.3 | 1.68796992481203 | 191 | 72 | 71.8 | 0 | 758 | 186 | 1 | 191 | MCB1084310.1 hypothetical protein [Simkania sp.] | diamond | 1347 | 234 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Simkaniaceae | Simkania | Simkania sp. | |
| 31293138 | 31293138 | PRJNA494251_P_NODE_28075_length_279_cov_1.213592_g27761_i0 | PRJNA494251 | 28075 | 279 | 1.213592 | 3.38592168 | root | 1 | Root_unresolved | Root_unresolved | 57.4 | 3.91e-7 | NR | MCB1148972.1 | 2052156 | g27761 | i0 | 40.2 | 3.53763440860215 | 82 | 47 | 88.2 | 1 | 30 | 275 | 361 | 440 | MCB1148972.1 alkaline phosphatase family protein [Chlamydiia bacterium] | diamond | 987 | 57.8 | 0.993079584775087 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Chlamydiia bacterium | ||||
| 32036826 | 32036826 | PRJNA494251_P_NODE_43458_length_246_cov_0.890173_g43144_i0 | PRJNA494251 | 43458 | 246 | 0.890173 | 2.18982558 | Chlamydiia bacterium | 2052156 | Bacteria | Bacteria | 57.8 | 1.75e-7 | NR | MBI3508072.1 | 2052156 | g43144 | i0 | 45.1 | 0.865853658536585 | 71 | 39 | 86.6 | 0 | 3 | 215 | 234 | 304 | MBI3508072.1 type I glyceraldehyde-3-phosphate dehydrogenase [Chlamydiia bacterium] | diamond | 213 | 57.8 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Chlamydiia bacterium | ||||
| 32448358 | 32448358 | PRJNA494251_P_NODE_17079_length_339_cov_0.868421_g16766_i0 | PRJNA494251 | 17079 | 339 | 0.868421 | 2.94394719 | Chlamydiales bacterium | 2047757 | Bacteria | Bacteria | 95.5 | 2.48e-20 | NR | MBN9377599.1 | 2047757 | g16766 | i0 | 45.5 | 0.991150442477876 | 112 | 59 | 98.2 | 2 | 3 | 335 | 33 | 143 | MBN9377599.1 protoporphyrinogen oxidase [Chlamydiales bacterium] | diamond | 336 | 95.5 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Chlamydiales | Chlamydiales bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;