RNAquarium Metadata Server
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contig_metadata

1 row where analysis = "diamond", bioproject = "PRJNA494251" and tax_phylum = "Candidatus Terryibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Terryibacteriota · 1 ✖

tax_clade 1

bioproject 1

  • PRJNA494251 · 1 ✖

analysis 1

  • diamond · 1 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28529800 28529800 PRJNA494251_P_NODE_28867_length_276_cov_1.354680_g28553_i0 PRJNA494251 28867 276 1.35468 3.7389168 Candidatus Terrybacteria bacterium RIFCSPLOWO2_ 2750081 Bacteria Bacteria 57 5.1e-7   NR OHA51932.1 1802366 g28553 i0 38 1 92 56 98.9 1 2 274 12 103 OHA51932.1 MAG: F0F1 ATP synthase subunit beta [Candidatus Terrybacteria bacterium RIFCSPLOWO2_01_FULL_40_23] diamond 276 57 1 Bacteria Bacteria candidate phyla   Candidatus Terryibacteriota         Candidatus Terrybacteria bacterium RIFCSPLOWO2_01_FULL_40_23

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;