RNAquarium Metadata Server
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contig_metadata

1 row where analysis = "diamond", bioproject = "PRJNA494251" and tax_phylum = "Candidatus Lindowiibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Lindowiibacteriota · 1 ✖

tax_clade 1

bioproject 1

  • PRJNA494251 · 1 ✖

analysis 1

  • diamond · 1 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
32716119 32716119 PRJNA494251_P_NODE_12000_length_392_cov_1.391850_g11693_i0 PRJNA494251 12000 392 1.39185 5.456052 Pseudomonadati 3379134 Bacteria Bacteria 130 6.86e-34   NR MBL4888489.1 2750076 g11693 i0 81.6 1.16326530612245 76 14 58.2 0 228 1 1 76 MBL4888489.1 hypothetical protein [Candidatus Lindowbacteria bacterium] diamond 456 130 1 Bacteria Bacteria candidate phyla   Candidatus Lindowiibacteriota         Candidatus Lindowiibacteriota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;