RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "diamond", bioproject = "PRJNA494251" and tax_phylum = "Candidatus Hydrogenedentota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Hydrogenedentota · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA494251 · 4 ✖

analysis 1

  • diamond · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27203121 27203121 PRJNA494251_P_NODE_33282_length_261_cov_1.510638_g32968_i0 PRJNA494251 33282 261 1.510638 3.94276518 Candidatus Hydrogenedentota bacterium 2030809 Bacteria Bacteria 40.8 0.0393   NR MCC6152982.1 2030809 g32968 i0 35.6 0.67816091954023 59 31 67.8 2 261 85 19 70 MCC6152982.1 aldo/keto reductase [Candidatus Hydrogenedentota bacterium] diamond 177 40.8 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium
27408837 27408837 PRJNA494251_P_NODE_29103_length_275_cov_1.519802_g28789_i0 PRJNA494251 29103 275 1.519802 4.1794555 Pseudomonadati 3379134 Bacteria Bacteria 95.5 2.8e-21   NR HRZ83383.1 2030809 g28789 i0 52.8 5.81454545454545 89 38 97.1 1 1 267 211 295 HRZ83383.1 phosphoenolpyruvate carboxykinase (ATP) [Candidatus Hydrogenedentota bacterium] diamond 1599 95.5 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium
28466642 28466642 PRJNA494251_P_NODE_12346_length_387_cov_1.579618_g12039_i0 PRJNA494251 12346 387 1.579618 6.11312166 Candidatus Hydrogenedentota bacterium 2030809 Bacteria Bacteria 175 2.6099999999999998e-48   NR MCH7959314.1 2030809 g12039 i0 61.2 1 129 50 100 0 387 1 125 253 MCH7959314.1 SDR family NAD(P)-dependent oxidoreductase [Candidatus Hydrogenedentota bacterium] diamond 387 175 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium
30692734 30692734 PRJNA494251_P_NODE_23033_length_300_cov_1.894273_g22719_i0 PRJNA494251 23033 300 1.894273 5.682819 root 1 Root_unresolved Root_unresolved 114 3.63e-29   NR MCX5771425.1 2030809 g22719 i0 59.8 5.16 87 32 87 1 39 299 76 159 MCX5771425.1 peptidylprolyl isomerase [Candidatus Hydrogenedentota bacterium] diamond 1548 114 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;