RNAquarium Metadata Server
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contig_metadata

5 rows where analysis = "diamond", bioproject = "PRJNA493828" and tax_phylum = "Zoopagomycota"

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tax_superkingdom 1

tax_phylum 1

  • Zoopagomycota · 5 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA493828 · 5 ✖

analysis 1

  • diamond · 5 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6852257 6852257 PRJNA493828_P_NODE_22406_length_279_cov_1.495146_g21987_i0 PRJNA493828 22406 279 1.495146 4.17145734 Eukaryota 2759 Fungi Fungi 145 2.09e-39   NR KAI8325671.1 61414 g21987 i0 71.4 19.5806451612903 91 26 97.8 0 274 2 337 427 KAI8325671.1 translation elongation factor 1-alpha [Martensiomyces pterosporus] diamond 5463 145 1 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Martensiomyces Martensiomyces pterosporus
30092310 30092310 PRJNA493828_P_NODE_35192_length_247_cov_0.885057_g34773_i0 PRJNA493828 35192 247 0.885057 2.18609079 Fungi 4751 Fungi Fungi 46.6 2.07e-4   NR KAJ1672597.1 68401 g34773 i0 42.9 5.19838056680162 42 24 51 0 154 29 10 51 KAJ1672597.1 hypothetical protein EV182_006874, partial [Spiromyces aspiralis] diamond 1284 46.6 1 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Spiromyces Spiromyces aspiralis
31087931 31087931 PRJNA493828_P_NODE_34255_length_248_cov_0.880000_g33836_i0 PRJNA493828 34255 248 0.88 2.1824 Dispira parvispora 1520584 Fungi Fungi 138 1.8799999999999998e-38   NR KAJ1970205.1 1520584 g33836 i0 73.2 3.91935483870968 82 22 99.2 0 1 246 81 162 KAJ1970205.1 60S ribosomal protein L2 [Dispira parvispora] diamond 972 138 1 Eukaryota Opisthokonta Fungi Zoopagomycota Dimargaritomycetes Dimargaritales Dimargaritaceae Dispira Dispira parvispora
31546411 31546411 PRJNA493828_P_NODE_33456_length_249_cov_1.204545_g33037_i0 PRJNA493828 33456 249 1.204545 2.99931705 Zoopagomycota 1913638 Fungi Fungi 104 5.870000000000001e-26   NR ORX96007.1 1314790 g33037 i0 62.8 7.43373493975904 78 29 94 0 15 248 1 78 ORX96007.1 ribosomal protein L18e [Basidiobolus meristosporus CBS 931.73] diamond 1851 105 0.990476190476191 Eukaryota Opisthokonta Fungi Zoopagomycota Basidiobolomycetes Basidiobolales Basidiobolaceae Basidiobolus Basidiobolus meristosporus
32606107 32606107 PRJNA493828_P_NODE_35780_length_246_cov_0.890173_g35361_i0 PRJNA493828 35780 246 0.890173 2.18982558 Basidiobolus meristosporus CBS 931.73 1314790 Fungi Fungi 65.1 5.08e-10   NR ORX94442.1 1314790 g35361 i0 54.2 2.15853658536585 59 27 72 0 242 66 157 215 ORX94442.1 DUF625-domain-containing protein [Basidiobolus meristosporus CBS 931.73] diamond 531 65.1 1 Eukaryota Opisthokonta Fungi Zoopagomycota Basidiobolomycetes Basidiobolales Basidiobolaceae Basidiobolus Basidiobolus meristosporus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;