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contig_metadata

14 rows where analysis = "diamond", bioproject = "PRJNA493828" and tax_phylum = "Verrucomicrobiota"

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tax_superkingdom 1

tax_phylum 1

  • Verrucomicrobiota · 14 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA493828 · 14 ✖

analysis 1

  • diamond · 14 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26792146 26792146 PRJNA493828_P_NODE_47441_length_202_cov_6.310078_g47022_i0 PRJNA493828 47441 202 6.310078 12.74635756 Verrucomicrobiales bacterium 2026801 Bacteria Bacteria 114 1.74e-29   NR MCI0535408.1 2026801 g47022 i0 83.6 1.99009900990099 67 11 99.5 0 2 202 47 113 MCI0535408.1 HEAT repeat domain-containing protein [Verrucomicrobiales bacterium] diamond 402 114 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales     Verrucomicrobiales bacterium
28245243 28245243 PRJNA493828_P_NODE_20906_length_284_cov_2.113744_g20487_i0 PRJNA493828 20906 284 2.113744 6.00303296 Verrucomicrobiaceae bacterium 2026800 Bacteria Bacteria 107 1.02e-25   NR RYD71573.1 2026800 g20487 i0 77.4 0.654929577464789 62 14 65.5 0 284 99 277 338 RYD71573.1 MAG: MiaB/RimO family radical SAM methylthiotransferase, partial [Verrucomicrobiaceae bacterium] diamond 186 107 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae   Verrucomicrobiaceae bacterium
28419106 28419106 PRJNA493828_P_NODE_44726_length_221_cov_5.560811_g44307_i0 PRJNA493828 44726 221 5.560811 12.28939231 Verrucomicrobiota 74201 Bacteria Bacteria 115 5.18e-28   NR RYD71824.1 2026800 g44307 i0 69.9 8.9185520361991 73 21 99.1 1 221 3 118 189 RYD71824.1 MAG: hypothetical protein EOP84_24225, partial [Verrucomicrobiaceae bacterium] diamond 1971 116 0.991379310344828 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae   Verrucomicrobiaceae bacterium
28908219 28908219 PRJNA493828_P_NODE_25268_length_270_cov_1.203046_g24849_i0 PRJNA493828 25268 270 1.203046 3.2482242 Rariglobus sp. 2706526 Bacteria Bacteria 112 1.64e-26   NR HEY9247700.1 2706526 g24849 i0 63 0.9 81 30 90 0 19 261 513 593 HEY9247700.1 hypothetical protein [Rariglobus sp.] diamond 243 112 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Opitutales Opitutaceae Rariglobus Rariglobus sp.
29744797 29744797 PRJNA493828_P_NODE_19210_length_290_cov_2.990783_g18791_i0 PRJNA493828 19210 290 2.990783 8.6732707 Verrucomicrobiota 74201 Bacteria Bacteria 114 2.86e-29   NR MES2572056.1 2026799 g18791 i0 55.2 4.01379310344828 96 41 97.2 1 282 1 60 155 MES2572056.1 multicopper oxidase domain-containing protein [Verrucomicrobiota bacterium] diamond 1164 114 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
29823969 29823969 PRJNA493828_P_NODE_16131_length_310_cov_2.329114_g15712_i0 PRJNA493828 16131 310 2.329114 7.2202534 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 159 1.0699999999999999e-43   NR PYI72093.1 2026799 g15712 i0 79.3 3.56129032258065 92 15 85.2 1 310 47 438 529 PYI72093.1 MAG: hypothetical protein DMF08_06960 [Verrucomicrobiota bacterium] diamond 1104 159 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
30045165 30045165 PRJNA493828_P_NODE_19831_length_288_cov_1.883721_g19412_i0 PRJNA493828 19831 288 1.883721 5.42511648 Chthoniobacteraceae bacterium 2811408 Bacteria Bacteria 72 1.81e-12   NR HET6407288.1 2811408 g19412 i0 94.3 0.364583333333333 35 2 36.5 0 184 288 1 35 HET6407288.1 lipoyl synthase [Chthoniobacteraceae bacterium] diamond 105 72 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Spartobacteria Chthoniobacterales Chthoniobacteraceae   Chthoniobacteraceae bacterium
30550722 30550722 PRJNA493828_P_NODE_33913_length_248_cov_3.022857_g33494_i0 PRJNA493828 33913 248 3.022857 7.49668536 Opitutaceae bacterium 2006848 Bacteria Bacteria 119 3.76e-30   NR HRE83121.1 2006848 g33494 i0 95.2 0.762096774193548 63 3 76.2 0 247 59 301 363 HRE83121.1 FecR domain-containing protein [Opitutaceae bacterium] diamond 189 119 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Opitutales Opitutaceae   Opitutaceae bacterium
31024845 31024845 PRJNA493828_P_NODE_45995_length_211_cov_4.376812_g45576_i0 PRJNA493828 45995 211 4.376812 9.23507332 Verrucomicrobiia bacterium 2499141 Bacteria Bacteria 85.5 2.2e-17   NR MCC6355890.1 2499141 g45576 i0 65.7 0.95260663507109 67 23 95.3 0 11 211 2729 2795 MCC6355890.1 SDR family NAD(P)-dependent oxidoreductase [Verrucomicrobiia bacterium] diamond 201 85.5 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia       Verrucomicrobiia bacterium
31293123 31293123 PRJNA493828_P_NODE_29615_length_257_cov_1.673913_g29196_i0 PRJNA493828 29615 257 1.673913 4.30195641 Chthoniobacter 295577 Bacteria Bacteria 86.7 4.3e-18   NR HEY3899370.1 2510640 g29196 i0 54.3 3.59533073929961 81 35 92.2 1 237 1 4 84 HEY3899370.1 RluA family pseudouridine synthase [Chthoniobacter sp.] diamond 924 86.7 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Spartobacteria Chthoniobacterales Chthoniobacteraceae Chthoniobacter Chthoniobacter sp.
32068300 32068300 PRJNA493828_P_NODE_27498_length_263_cov_1.615789_g27079_i0 PRJNA493828 27498 263 1.615789 4.24952507 Chthoniobacteraceae bacterium 2811408 Bacteria Bacteria 116 1.21e-30   NR HET6407168.1 2811408 g27079 i0 78.1 0.730038022813688 64 14 73 0 263 72 125 188 HET6407168.1 PAS domain-containing protein [Chthoniobacteraceae bacterium] diamond 192 116 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Spartobacteria Chthoniobacterales Chthoniobacteraceae   Chthoniobacteraceae bacterium
32100017 32100017 PRJNA493828_P_NODE_45238_length_217_cov_4.666667_g44819_i0 PRJNA493828 45238 217 4.666667 10.12666739 Chthoniobacteraceae bacterium 2811408 Bacteria Bacteria 94.7 1.27e-20   NR HET6409878.1 2811408 g44819 i0 64.3 0.967741935483871 70 25 96.8 0 212 3 235 304 HET6409878.1 lamin tail domain-containing protein [Chthoniobacteraceae bacterium] diamond 210 94.7 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Spartobacteria Chthoniobacterales Chthoniobacteraceae   Chthoniobacteraceae bacterium
32637329 32637329 PRJNA493828_P_NODE_20700_length_285_cov_1.448113_g20281_i0 PRJNA493828 20700 285 1.448113 4.12712205 Chthoniobacteraceae bacterium 2811408 Bacteria Bacteria 129 1.41e-34   NR MEQ1862498.1 2811408 g20281 i0 70.2 0.989473684210526 94 28 98.9 0 283 2 36 129 MEQ1862498.1 hypothetical protein [Chthoniobacteraceae bacterium] diamond 282 129 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Spartobacteria Chthoniobacterales Chthoniobacteraceae   Chthoniobacteraceae bacterium
32889319 32889319 PRJNA493828_P_NODE_15860_length_310_cov_2.691983_g15441_i0 PRJNA493828 15860 310 2.691983 8.3451473 Chthoniobacteraceae bacterium 2811408 Bacteria Bacteria 102 4.49e-24   NR HET6406353.1 2811408 g15441 i0 90.7 0.52258064516129 54 5 52.3 0 147 308 37 90 HET6406353.1 dienelactone hydrolase family protein [Chthoniobacteraceae bacterium] diamond 162 102 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Spartobacteria Chthoniobacterales Chthoniobacteraceae   Chthoniobacteraceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;