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contig_metadata

7 rows where analysis = "diamond", bioproject = "PRJNA493828" and tax_phylum = "Platyhelminthes"

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tax_superkingdom 1

tax_phylum 1

  • Platyhelminthes · 7 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA493828 · 7 ✖

analysis 1

  • diamond · 7 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27408827 27408827 PRJNA493828_P_NODE_34003_length_248_cov_2.371429_g33584_i0 PRJNA493828 34003 248 2.371429 5.88114392 Metazoa 33208 Platyhelminthes Platyhelminthes 103 2.1399999999999994e-23   NR THD19534.1 6192 g33584 i0 66.2 8.69758064516129 77 25 93.1 1 231 1 743 818 THD19534.1 KRAB-A domain-containing protein [Fasciola hepatica] diamond 2157 103 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Plagiorchiida Fasciolidae Fasciola Fasciola hepatica
28008652 28008652 PRJNA493828_P_NODE_43965_length_226_cov_5.150327_g43546_i0 PRJNA493828 43965 226 5.150327 11.63973902 Trematoda 6178 Platyhelminthes Platyhelminthes 57.4 2.11e-7   NR VDP31318.1 6186 g43546 i0 67.5 1.5929203539823 40 13 53.1 0 121 2 1 40 VDP31318.1 unnamed protein product [Schistosoma curassoni] diamond 360 57.4 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma curassoni
28040122 28040122 PRJNA493828_P_NODE_39545_length_241_cov_1.494048_g39126_i0 PRJNA493828 39545 241 1.494048 3.60065568 Paragonimus 34503 Platyhelminthes Platyhelminthes 58.5 9.83e-8   NR KAF7255426.1 59628 g39126 i0 58.7 2.17842323651452 63 23 74.7 2 61 240 229 291 KAF7255426.1 hypothetical protein EG68_07515 [Paragonimus skrjabini miyazakii] diamond 525 58.9 0.99320882852292 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Plagiorchiida Troglotrematidae Paragonimus Paragonimus skrjabini miyazakii
29003709 29003709 PRJNA493828_P_NODE_36328_length_245_cov_1.773256_g35909_i0 PRJNA493828 36328 245 1.773256 4.3444772 Dugesia japonica 6161 Platyhelminthes Platyhelminthes 92.4 1.02e-21   NR BAL40993.1 6161 g35909 i0 77.4 0.759183673469388 62 14 75.9 0 25 210 85 146 BAL40993.1 NADH dehydrogenase subunit 6, partial [Dugesia japonica] diamond 186 92.4 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Tricladida Dugesiidae Dugesia Dugesia japonica
29192824 29192824 PRJNA493828_P_NODE_20029_length_287_cov_2.878505_g19610_i0 PRJNA493828 20029 287 2.878505 8.26130935 Macrostomum lignano 282301 Platyhelminthes Platyhelminthes 92 6.38e-20   NR PAA80599.1 282301 g19610 i0 58.1 5.09059233449477 62 26 64.8 0 9 194 1 62 PAA80599.1 hypothetical protein BOX15_Mlig022332g1 [Macrostomum lignano] diamond 1461 92 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Macrostomida Macrostomidae Macrostomum Macrostomum lignano
30266793 30266793 PRJNA493828_P_NODE_41472_length_235_cov_3.222222_g41053_i0 PRJNA493828 41472 235 3.222222 7.5722217 Schmidtea mediterranea 79327 Platyhelminthes Platyhelminthes 102 2.1e-25   NR ADW66114.1 79327 g41053 i0 55.1 0.995744680851064 78 35 99.6 0 2 235 34 111 ADW66114.1 pol polyprotein, partial [Schmidtea mediterranea] diamond 234 102 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Tricladida Dugesiidae Schmidtea Schmidtea mediterranea
30456397 30456397 PRJNA493828_P_NODE_34113_length_248_cov_1.645714_g33694_i0 PRJNA493828 34113 248 1.645714 4.08137072 Cichlidogyrus casuarinus 1844966 Platyhelminthes Platyhelminthes 53.9 4.5e-6   NR KAL3316647.1 1844966 g33694 i0 39.5 1.04032258064516 86 46 99.2 2 1 246 94 177 KAL3316647.1 DNA polymerase epsilon subunit 2 [Cichlidogyrus casuarinus] diamond 258 53.9 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Monogenea Dactylogyridea Ancyrocephalidae Cichlidogyrus Cichlidogyrus casuarinus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;