RNAquarium Metadata Server
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contig_metadata

7 rows where analysis = "diamond", bioproject = "PRJNA493828" and tax_phylum = "Negarnaviricota"

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tax_superkingdom 1

tax_phylum 1

  • Negarnaviricota · 7 ✖

tax_kingdom 1

bioproject 1

  • PRJNA493828 · 7 ✖

analysis 1

  • diamond · 7 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5578219 5578219 PRJNA493828_P_NODE_24825_length_271_cov_1.924242_g24406_i0 PRJNA493828 24825 271 1.924242 5.21469582 brine shrimp yue-like virus 6 2900458 Viruses Viruses 159 4.4199999999999986e-43   NR UNI74179.1 2900458 g24406 i0 84.4 0.996309963099631 90 14 99.6 0 1 270 1039 1128 UNI74179.1 MAG: RNA-dependent RNA polymerase [brine shrimp yue-like virus 6] diamond 270 159 1 Viruses   Orthornavirae Negarnaviricota Yunchangviricetes Goujianvirales Yueviridae   brine shrimp yue-like virus 6
26760254 26760254 PRJNA493828_P_NODE_26621_length_265_cov_3.859375_g26202_i0 PRJNA493828 26621 265 3.859375 10.22734375 Vesicular stomatitis Indiana virus 11277 Viruses Viruses 71.6 2.78e-13   NR ULT60395.1 11277 g26202 i0 51.1 1.99245283018868 88 43 99.6 0 1 264 45 132 ULT60395.1 phosphoprotein, partial [Vesicular stomatitis Indiana virus] diamond 528 71.6 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Rhabdoviridae Vesiculovirus Vesiculovirus indiana
29318906 29318906 PRJNA493828_P_NODE_869_length_1125_cov_3.092205_g637_i0 PRJNA493828 869 1125 3.092205 34.78730625 brine shrimp yue-like virus 3 2900455 Viruses Viruses 320 4.5e-103   NR UNI74154.1 2900455 g637 i0 49.3 2.55733333333333 300 151 80 1 901 2 65 363 UNI74154.1 MAG: hypothetical protein [brine shrimp yue-like virus 3] diamond 2877 320 1 Viruses   Orthornavirae Negarnaviricota Yunchangviricetes Goujianvirales Yueviridae   brine shrimp yue-like virus 3
29429070 29429070 PRJNA493828_P_NODE_12449_length_329_cov_3.746094_g12030_i0 PRJNA493828 12449 329 3.746094 12.32464926 root 1 Root_unresolved Root_unresolved 134 4.03e-35   NR WEF36404.1 11277 g12030 i0 76.4 1.62310030395137 89 21 81.2 0 24 290 58 146 WEF36404.1 nucleocapsid protein [Vesicular stomatitis Indiana virus] diamond 534 134 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Rhabdoviridae Vesiculovirus Vesiculovirus indiana
31419657 31419657 PRJNA493828_P_NODE_40536_length_238_cov_5.521212_g40117_i0 PRJNA493828 40536 238 5.521212 13.14048456 Vesiculovirus 11271 Viruses Viruses 120 9.92e-30   NR NP_041715.1 11277 g40117 i0 70.9 1.99159663865546 79 23 99.6 0 1 237 193 271 NP_041715.1 glycoprotein (G protein) precursor [Vesicular stomatitis Indiana virus] diamond 474 120 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Rhabdoviridae Vesiculovirus Vesiculovirus indiana
31435666 31435666 PRJNA493828_P_NODE_25796_length_268_cov_1.882051_g25377_i0 PRJNA493828 25796 268 1.882051 5.04389668 brine shrimp yue-like virus 8 2900460 Viruses Viruses 132 1.17e-33   NR UNI74191.1 2900460 g25377 i0 72.8 1.02985074626866 92 22 99.6 1 2 268 1596 1687 UNI74191.1 MAG: RNA-dependent RNA polymerase [brine shrimp yue-like virus 8] diamond 276 132 1 Viruses   Orthornavirae Negarnaviricota Yunchangviricetes Goujianvirales Yueviridae   brine shrimp yue-like virus 8
32290274 32290274 PRJNA493828_P_NODE_12219_length_332_cov_1.942085_g11800_i0 PRJNA493828 12219 332 1.942085 6.4477222 brine shrimp arlivirus 5 2900380 Viruses Viruses 94 6.02e-20   NR UNI74090.1 2900380 g11800 i0 69.2 0.587349397590361 65 20 58.7 0 330 136 342 406 UNI74090.1 MAG: hypothetical protein [brine shrimp arlivirus 5] diamond 195 94 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Lispiviridae Artemvirus Artemvirus bsafivalis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;