contig_metadata
14 rows where analysis = "diamond", bioproject = "PRJNA493828" and tax_phylum = "Myxococcota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 17052159 | 17052159 | PRJNA493828_P_NODE_37934_length_243_cov_0.905882_g37515_i0 | PRJNA493828 | 37934 | 243 | 0.905882 | 2.20129326 | Polyangiaceae bacterium | 2268199 | Bacteria | Bacteria | 126 | 3.96e-32 | NR | HEX5101900.1 | 2268199 | g37515 | i0 | 70 | 1.97530864197531 | 80 | 24 | 98.8 | 0 | 241 | 2 | 411 | 490 | HEX5101900.1 lipase maturation factor family protein [Polyangiaceae bacterium] | diamond | 480 | 126 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | Polyangiaceae bacterium | ||||
| 22151032 | 22151032 | PRJNA493828_P_NODE_15358_length_310_cov_3.075949_g14939_i0 | PRJNA493828 | 15358 | 310 | 3.075949 | 9.5354419 | Myxococcota bacterium | 2818507 | Bacteria | Bacteria | 85.9 | 8.48e-20 | NR | HVH04409.1 | 2818507 | g14939 | i0 | 97.6 | 0.406451612903226 | 42 | 1 | 40.6 | 0 | 127 | 2 | 1 | 42 | HVH04409.1 LemA family protein [Myxococcota bacterium] | diamond | 126 | 85.9 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcota bacterium | ||||||
| 22151182 | 22151182 | PRJNA493828_P_NODE_23918_length_274_cov_1.686567_g23499_i0 | PRJNA493828 | 23918 | 274 | 1.686567 | 4.62119358 | Polyangiaceae bacterium | 2268199 | Bacteria | Bacteria | 166 | 4.129999999999999e-48 | NR | HEY3496663.1 | 2268199 | g23499 | i0 | 90 | 0.985401459854015 | 90 | 9 | 98.5 | 0 | 5 | 274 | 160 | 249 | HEY3496663.1 phospho-N-acetylmuramoyl-pentapeptide-transferase [Polyangiaceae bacterium] | diamond | 270 | 166 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | Polyangiaceae bacterium | ||||
| 26665132 | 26665132 | PRJNA493828_P_NODE_43801_length_227_cov_2.876623_g43382_i0 | PRJNA493828 | 43801 | 227 | 2.876623 | 6.52993421 | Polyangiaceae bacterium | 2268199 | Bacteria | Bacteria | 133 | 1.32e-34 | NR | HEY3498849.1 | 2268199 | g43382 | i0 | 89.3 | 0.991189427312775 | 75 | 8 | 99.1 | 0 | 227 | 3 | 338 | 412 | HEY3498849.1 DUF58 domain-containing protein [Polyangiaceae bacterium] | diamond | 225 | 133 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | Polyangiaceae bacterium | ||||
| 26887260 | 26887260 | PRJNA493828_P_NODE_35961_length_246_cov_0.890173_g35542_i0 | PRJNA493828 | 35961 | 246 | 0.890173 | 2.18982558 | Polyangiaceae bacterium | 2268199 | Bacteria | Bacteria | 42 | 0.025 | NR | HTQ47759.1 | 2268199 | g35542 | i0 | 42.3 | 0.634146341463415 | 52 | 29 | 62.2 | 1 | 166 | 14 | 22 | 73 | HTQ47759.1 cereblon family protein [Polyangiaceae bacterium] | diamond | 156 | 42 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | Polyangiaceae bacterium | ||||
| 28434981 | 28434981 | PRJNA493828_P_NODE_29326_length_258_cov_1.427027_g28907_i0 | PRJNA493828 | 29326 | 258 | 1.427027 | 3.68172966 | Kofleriaceae bacterium | 2212474 | Bacteria | Bacteria | 84.3 | 7.33e-17 | NR | MEZ4360189.1 | 2212474 | g28907 | i0 | 81.8 | 0.511627906976744 | 44 | 8 | 51.2 | 0 | 256 | 125 | 358 | 401 | MEZ4360189.1 beta-ketoacyl synthase N-terminal-like domain-containing protein [Kofleriaceae bacterium] | diamond | 132 | 84.3 | 1 | Bacteria | Pseudomonadati | Myxococcota | Haliangiales | Kofleriaceae | Kofleriaceae bacterium | ||||
| 28561326 | 28561326 | PRJNA493828_P_NODE_40147_length_240_cov_2.574850_g39728_i0 | PRJNA493828 | 40147 | 240 | 2.57485 | 6.17964 | Deltaproteobacteria bacterium | 2026735 | Bacteria | Bacteria | 77 | 1.44e-15 | NR | MBI5590671.1 | 2026735 | g39728 | i0 | 48.8 | 1 | 80 | 40 | 100 | 1 | 1 | 240 | 24 | 102 | MBI5590671.1 type VI secretion system tube protein Hcp [Deltaproteobacteria bacterium] | diamond | 240 | 77 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Deltaproteobacteria bacterium | |||||
| 29208469 | 29208469 | PRJNA493828_P_NODE_43749_length_227_cov_3.311688_g43330_i0 | PRJNA493828 | 43749 | 227 | 3.311688 | 7.51753176 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 58.5 | 7.46e-9 | NR | MBW1792115.1 | 2026735 | g43330 | i0 | 46.9 | 1.24229074889868 | 49 | 26 | 64.8 | 0 | 188 | 42 | 2 | 50 | MBW1792115.1 hypothetical protein [Deltaproteobacteria bacterium] | diamond | 282 | 58.9 | 0.99320882852292 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Deltaproteobacteria bacterium | |||||
| 29255599 | 29255599 | PRJNA493828_P_NODE_32129_length_251_cov_0.865169_g31710_i0 | PRJNA493828 | 32129 | 251 | 0.865169 | 2.17157419 | Myxococcales bacterium | 2026763 | Bacteria | Bacteria | 83.2 | 2.38e-16 | NR | MSQ81441.1 | 2026763 | g31710 | i0 | 73.1 | 1.24302788844622 | 52 | 14 | 62.2 | 0 | 1 | 156 | 692 | 743 | MSQ81441.1 hypothetical protein [Myxococcales bacterium] | diamond | 312 | 83.2 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcales bacterium | ||||
| 31324740 | 31324740 | PRJNA493828_P_NODE_29635_length_257_cov_1.668478_g29216_i0 | PRJNA493828 | 29635 | 257 | 1.668478 | 4.28798846 | Myxococcia | 32015 | Bacteria | Bacteria | 49.3 | 2.19e-4 | NR | MCA9692965.1 | 2026763 | g29216 | i0 | 60.5 | 0.88715953307393 | 38 | 14 | 43.2 | 1 | 125 | 15 | 747 | 784 | MCA9692965.1 VWA domain-containing protein [Myxococcales bacterium] | diamond | 228 | 49.3 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcales bacterium | ||||
| 31372652 | 31372652 | PRJNA493828_P_NODE_21356_length_283_cov_1.114286_g20937_i0 | PRJNA493828 | 21356 | 283 | 1.114286 | 3.15342938 | Polyangiaceae bacterium | 2268199 | Bacteria | Bacteria | 82.4 | 2.95e-16 | NR | HEY3497072.1 | 2268199 | g20937 | i0 | 71.4 | 0.593639575971731 | 56 | 16 | 59.4 | 0 | 283 | 116 | 261 | 316 | HEY3497072.1 helix-turn-helix transcriptional regulator [Polyangiaceae bacterium] | diamond | 168 | 82.4 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | Polyangiaceae bacterium | ||||
| 31562470 | 31562470 | PRJNA493828_P_NODE_21896_length_281_cov_1.264423_g21477_i0 | PRJNA493828 | 21896 | 281 | 1.264423 | 3.55302863 | Polyangiaceae bacterium | 2268199 | Bacteria | Bacteria | 72 | 1.4e-13 | NR | HEY3498920.1 | 2268199 | g21477 | i0 | 74.4 | 3.56583629893238 | 43 | 11 | 45.9 | 0 | 279 | 151 | 98 | 140 | HEY3498920.1 EscU/YscU/HrcU family type III secretion system export apparatus switch protein [Polyangiaceae bacterium] | diamond | 1002 | 72 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | Polyangiaceae bacterium | ||||
| 32036773 | 32036773 | PRJNA493828_P_NODE_46558_length_207_cov_5.194030_g46139_i0 | PRJNA493828 | 46558 | 207 | 5.19403 | 10.7516421 | Nannocystis sp. | 1962667 | Bacteria | Bacteria | 105 | 6.099999999999999e-25 | NR | MBK8261646.1 | 1962667 | g46139 | i0 | 76.5 | 6.88405797101449 | 68 | 16 | 98.6 | 0 | 204 | 1 | 309 | 376 | MBK8261646.1 acetyl-CoA C-acetyltransferase [Nannocystis sp.] | diamond | 1425 | 105 | 1 | Bacteria | Pseudomonadati | Myxococcota | Nannocystales | Nannocystaceae | Nannocystis | Nannocystis sp. | |||
| 32479930 | 32479930 | PRJNA493828_P_NODE_42899_length_230_cov_2.700637_g42480_i0 | PRJNA493828 | 42899 | 230 | 2.700637 | 6.2114651 | Deltaproteobacteria bacterium | 2026735 | Bacteria | Bacteria | 73.6 | 3.4e-13 | NR | MEO8178807.1 | 2026735 | g42480 | i0 | 43.9 | 0.860869565217391 | 66 | 37 | 86.1 | 0 | 228 | 31 | 299 | 364 | MEO8178807.1 hypothetical protein [Deltaproteobacteria bacterium] | diamond | 198 | 73.6 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Deltaproteobacteria bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;