RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA493828" and tax_phylum = "Methanobacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Methanobacteriota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA493828 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28513667 28513667 PRJNA493828_P_NODE_18127_length_296_cov_0.995516_g17708_i0 PRJNA493828 18127 296 0.995516 2.94672736 Methanobacteriati 3366610 Archaea Archaea 43.5 0.0366   NR MAI09409.1 2026739 g17708 i0 40 0.810810810810811 40 24 40.5 0 292 173 81 120 MAI09409.1 hypothetical protein [Methanobacteriota archaeon] diamond 240 43.5 1 Archaea   Methanobacteriati Methanobacteriota         Methanobacteriota archaeon
32432191 32432191 PRJNA493828_P_NODE_36879_length_244_cov_3.122807_g36460_i0 PRJNA493828 36879 244 3.122807 7.61964908 Candidatus Methanofastidiosum 2666130 Archaea Archaea 154 4.8899999999999986e-43   NR NMC77251.1 2099674 g36460 i0 97.5 1.9672131147541 80 2 98.4 0 3 242 174 253 NMC77251.1 aspartate--tRNA(Asn) ligase [Candidatus Methanofastidiosia archaeon] diamond 480 154 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Candidatus Methanofastidiosia       Candidatus Methanofastidiosia archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;