contig_metadata
11 rows where analysis = "diamond", bioproject = "PRJNA493828" and tax_phylum = "Bdellovibrionota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 22783628 | 22783628 | PRJNA493828_P_NODE_25278_length_270_cov_1.172589_g24859_i0 | PRJNA493828 | 25278 | 270 | 1.172589 | 3.1659903 | Bdellovibrio bacteriovorus | 959 | Bacteria | Bacteria | 95.9 | 1.59e-21 | NR | WP_088564899.1 | 959 | g24859 | i0 | 67.9 | 2.72222222222222 | 81 | 24 | 87.8 | 1 | 239 | 3 | 1 | 81 | WP_088564899.1 hypothetical protein [Bdellovibrio bacteriovorus] | diamond | 735 | 95.9 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio bacteriovorus | ||
| 27123801 | 27123801 | PRJNA493828_P_NODE_31442_length_252_cov_2.173184_g31023_i0 | PRJNA493828 | 31442 | 252 | 2.173184 | 5.47642368 | Bdellovibrio | 958 | Bacteria | Bacteria | 135 | 1.6e-38 | NR | MBC7741563.1 | 28201 | g31023 | i0 | 72.6 | 7 | 84 | 23 | 100 | 0 | 1 | 252 | 26 | 109 | MBC7741563.1 DoxX family protein [Bdellovibrio sp.] | diamond | 1764 | 136 | 0.992647058823529 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio sp. | ||
| 27677430 | 27677430 | PRJNA493828_P_NODE_41484_length_235_cov_3.074074_g41065_i0 | PRJNA493828 | 41484 | 235 | 3.074074 | 7.2240739 | Pseudobdellovibrio sp. | 2862747 | Bacteria | Bacteria | 58.9 | 6.56e-8 | NR | MFN3696400.1 | 2862747 | g41065 | i0 | 75.8 | 1.26382978723404 | 33 | 8 | 42.1 | 0 | 136 | 234 | 1 | 33 | MFN3696400.1 cysteine--tRNA ligase [Pseudobdellovibrio sp.] | diamond | 297 | 58.9 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Pseudobdellovibrio | Pseudobdellovibrio sp. | ||
| 27740603 | 27740603 | PRJNA493828_P_NODE_46264_length_209_cov_4.948529_g45845_i0 | PRJNA493828 | 46264 | 209 | 4.948529 | 10.34242561 | Bdellovibrionales bacterium | 2053517 | Bacteria | Bacteria | 97.8 | 4.43e-22 | NR | MBX3020441.1 | 2053517 | g45845 | i0 | 65.2 | 1.99521531100478 | 69 | 24 | 99 | 0 | 1 | 207 | 232 | 300 | MBX3020441.1 radical SAM family heme chaperone HemW [Bdellovibrionales bacterium] | diamond | 417 | 97.8 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Bdellovibrionales bacterium | ||||
| 29019134 | 29019134 | PRJNA493828_P_NODE_30368_length_255_cov_1.956044_g29949_i0 | PRJNA493828 | 30368 | 255 | 1.956044 | 4.9879122 | Bacteria | 2 | Bacteria | Bacteria | 150 | 5.85e-40 | NR | HVK61956.1 | 2053517 | g29949 | i0 | 87.5 | 2.82352941176471 | 80 | 10 | 94.1 | 0 | 251 | 12 | 749 | 828 | HVK61956.1 DNA polymerase III subunit alpha [Bdellovibrionales bacterium] | diamond | 720 | 150 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Bdellovibrionales bacterium | ||||
| 30266787 | 30266787 | PRJNA493828_P_NODE_25092_length_270_cov_2.319797_g24673_i0 | PRJNA493828 | 25092 | 270 | 2.319797 | 6.2634519 | Bdellovibrionales bacterium | 2053517 | Bacteria | Bacteria | 109 | 1.4e-25 | NR | MFN8792485.1 | 2053517 | g24673 | i0 | 66.7 | 2.82222222222222 | 84 | 28 | 93.3 | 0 | 267 | 16 | 460 | 543 | MFN8792485.1 hypothetical protein [Bdellovibrionales bacterium] | diamond | 762 | 109 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Bdellovibrionales bacterium | ||||
| 30298533 | 30298533 | PRJNA493828_P_NODE_41232_length_236_cov_2.914110_g40813_i0 | PRJNA493828 | 41232 | 236 | 2.91411 | 6.8772996 | Micavibrio aeruginosavorus | 349221 | Bacteria | Bacteria | 94.7 | 3.36e-23 | NR | PZQ43931.1 | 349221 | g40813 | i0 | 84.7 | 1.5 | 59 | 8 | 73.7 | 1 | 63 | 236 | 1 | 59 | PZQ43931.1 MAG: 50S ribosomal protein L21 [Micavibrio aeruginosavorus] | diamond | 354 | 94.7 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Micavibrio | Micavibrio aeruginosavorus | ||
| 30393295 | 30393295 | PRJNA493828_P_NODE_30193_length_255_cov_3.615385_g29774_i0 | PRJNA493828 | 30193 | 255 | 3.615385 | 9.21923175 | Bdellovibrionota bacterium | 3034175 | Bacteria | Bacteria | 54.7 | 1.2e-7 | NR | HLB58800.1 | 3034175 | g29774 | i0 | 61.9 | 0.494117647058824 | 42 | 16 | 49.4 | 0 | 240 | 115 | 6 | 47 | HLB58800.1 DUF2283 domain-containing protein [Bdellovibrionota bacterium] | diamond | 126 | 54.7 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionota bacterium | ||||||
| 30993207 | 30993207 | PRJNA493828_P_NODE_15274_length_310_cov_3.156118_g14855_i0 | PRJNA493828 | 15274 | 310 | 3.156118 | 9.7839658 | Micavibrio aeruginosavorus | 349221 | Bacteria | Bacteria | 55.5 | 1.66e-6 | NR | PZP55900.1 | 349221 | g14855 | i0 | 54.2 | 0.464516129032258 | 48 | 22 | 46.5 | 0 | 163 | 306 | 50 | 97 | PZP55900.1 MAG: hypothetical protein DI586_05470 [Micavibrio aeruginosavorus] | diamond | 144 | 55.5 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Micavibrio | Micavibrio aeruginosavorus | ||
| 32574889 | 32574889 | PRJNA493828_P_NODE_47279_length_203_cov_5.330769_g46860_i0 | PRJNA493828 | 47279 | 203 | 5.330769 | 10.82146107 | Micavibrio sp. | 2024841 | Bacteria | Bacteria | 44.7 | 0.00457 | NR | MFA5591923.1 | 2024841 | g46860 | i0 | 41.4 | 0.857142857142857 | 58 | 31 | 81.3 | 1 | 167 | 3 | 24 | 81 | MFA5591923.1 TcpQ domain-containing protein [Micavibrio sp.] | diamond | 174 | 44.7 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Micavibrio | Micavibrio sp. | ||
| 32794767 | 32794767 | PRJNA493828_P_NODE_14600_length_310_cov_4.421941_g14181_i0 | PRJNA493828 | 14600 | 310 | 4.421941 | 13.7080171 | Micavibrio sp. | 2024841 | Bacteria | Bacteria | 92.8 | 1.84e-19 | NR | MDE1153379.1 | 2024841 | g14181 | i0 | 67.1 | 0.67741935483871 | 70 | 23 | 67.7 | 0 | 309 | 100 | 413 | 482 | MDE1153379.1 signal recognition particle protein [Micavibrio sp.] | diamond | 210 | 92.8 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Micavibrio | Micavibrio sp. |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;