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contig_metadata

26 rows where analysis = "diamond", bioproject = "PRJNA493828" and tax_phylum = "Acidobacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Acidobacteriota · 26 ✖

tax_kingdom 1

bioproject 1

  • PRJNA493828 · 26 ✖

analysis 1

  • diamond · 26 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
474734 474734 PRJNA493828_P_NODE_28481_length_260_cov_1.647059_g28062_i0 PRJNA493828 28481 260 1.647059 4.2823534 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 106 7.94e-27   NR HEU4510996.1 2283092 g28062 i0 100 1.10769230769231 47 0 54.2 0 260 120 131 177 HEU4510996.1 hypothetical protein [Pyrinomonadaceae bacterium] diamond 288 106 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
474862 474862 PRJNA493828_P_NODE_37261_length_244_cov_0.900585_g36842_i0 PRJNA493828 37261 244 0.900585 2.1974274 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 167 1.12e-47   NR MCD9187173.1 2283092 g36842 i0 100 0.995901639344262 81 0 99.6 0 244 2 404 484 MCD9187173.1 type VI secretion system contractile sheath large subunit [Pyrinomonadaceae bacterium] diamond 243 167 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
3025810 3025810 PRJNA493828_P_NODE_41863_length_234_cov_2.546584_g41444_i0 PRJNA493828 41863 234 2.546584 5.95900656 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 145 2.85e-40   NR HJT28574.1 2283092 g41444 i0 92.3 1 78 6 100 0 1 234 46 123 HJT28574.1 sigma-54 dependent transcriptional regulator [Pyrinomonadaceae bacterium] diamond 234 145 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
4934868 4934868 PRJNA493828_P_NODE_42844_length_230_cov_3.133758_g42425_i0 PRJNA493828 42844 230 3.133758 7.2076434 Vicinamibacterales bacterium 2910147 Bacteria Bacteria 114 1.92e-28   NR HTH00434.1 2910147 g42425 i0 82.3 4.04347826086957 62 11 80.9 0 2 187 310 371 HTH00434.1 lactonase family protein [Vicinamibacterales bacterium] diamond 930 114 1 Bacteria   Pseudomonadati Acidobacteriota Vicinamibacteria Vicinamibacterales     Vicinamibacterales bacterium
26950183 26950183 PRJNA493828_P_NODE_27082_length_264_cov_1.994764_g26663_i0 PRJNA493828 27082 264 1.994764 5.26617696 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 165 6.54e-49   NR HQU86907.1 2283092 g26663 i0 93.1 4.98863636363636 87 6 98.9 0 1 261 152 238 HQU86907.1 hydrogenase formation protein HypD [Pyrinomonadaceae bacterium] diamond 1317 165 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
26981977 26981977 PRJNA493828_P_NODE_33222_length_249_cov_2.232955_g32803_i0 PRJNA493828 33222 249 2.232955 5.56005795 Vicinamibacterales bacterium 2910147 Bacteria Bacteria 168 3.05e-50   NR HET9268245.1 2910147 g32803 i0 100 0.987951807228916 82 0 98.8 0 2 247 14 95 HET9268245.1 PP2C family protein-serine/threonine phosphatase [Vicinamibacterales bacterium] diamond 246 168 1 Bacteria   Pseudomonadati Acidobacteriota Vicinamibacteria Vicinamibacterales     Vicinamibacterales bacterium
27361597 27361597 PRJNA493828_P_NODE_32883_length_250_cov_0.870056_g32464_i0 PRJNA493828 32883 250 0.870056 2.17514 Thermoanaerobaculia bacterium 2651171 Bacteria Bacteria 54.7 2.48e-6   NR HEY6929205.1 2651171 g32464 i0 41.5 3.936 82 46 98.4 2 3 248 236 315 HEY6929205.1 kelch repeat-containing protein [Thermoanaerobaculia bacterium] diamond 984 54.7 1 Bacteria   Pseudomonadati Acidobacteriota Thermoanaerobaculia       Thermoanaerobaculia bacterium
27503475 27503475 PRJNA493828_P_NODE_41123_length_236_cov_4.944785_g40704_i0 PRJNA493828 41123 236 4.944785 11.6696926 Acidobacteriota 57723 Bacteria Bacteria 128 3.02e-35   NR HMC73635.1 2282142 g40704 i0 82.7 4.76694915254237 75 13 95.3 0 2 226 115 189 HMC73635.1 PP2C family protein-serine/threonine phosphatase [Terriglobales bacterium] diamond 1125 128 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales     Terriglobales bacterium
27519283 27519283 PRJNA493828_P_NODE_9423_length_369_cov_4.175676_g9006_i0 PRJNA493828 9423 369 4.175676 15.40824444 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 87 3.84e-19   NR HEY8561019.1 2283092 g9006 i0 66.2 0.601626016260163 74 20 58.5 3 367 152 37 107 HEY8561019.1 hypothetical protein [Pyrinomonadaceae bacterium] diamond 222 87 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
27566290 27566290 PRJNA493828_P_NODE_39264_length_241_cov_2.958333_g38845_i0 PRJNA493828 39264 241 2.958333 7.12958253 Acidobacteriota 57723 Bacteria Bacteria 142 1.4099999999999998e-37   NR MBK8464424.1 2099375 g38845 i0 90 2.98755186721992 80 8 99.6 0 2 241 539 618 MBK8464424.1 DNA mismatch repair endonuclease MutL [Chloracidobacterium sp.] diamond 720 142 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Acidobacteriaceae Chloracidobacterium Chloracidobacterium sp.
27803564 27803564 PRJNA493828_P_NODE_48464_length_197_cov_5.524194_g48045_i0 PRJNA493828 48464 197 5.524194 10.88266218 Acidobacteriota bacterium 1978231 Bacteria Bacteria 73.6 1.43e-13   NR MBA3784245.1 1978231 g48045 i0 72.4 1.84263959390863 58 15 86.8 1 7 177 116 173 MBA3784245.1 prepilin peptidase [Acidobacteriota bacterium] diamond 363 73.6 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
28024527 28024527 PRJNA493828_P_NODE_15665_length_310_cov_2.827004_g15246_i0 PRJNA493828 15665 310 2.827004 8.7637124 Blastocatellia bacterium 2052146 Bacteria Bacteria 48.1 9.22e-4   NR HEX9000641.1 2052146 g15246 i0 95.7 0.22258064516129 23 1 22.3 0 240 308 1 23 HEX9000641.1 TIM barrel protein [Blastocatellia bacterium] diamond 69 48.1 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia       Blastocatellia bacterium
28813518 28813518 PRJNA493828_P_NODE_45108_length_218_cov_4.800000_g44689_i0 PRJNA493828 45108 218 4.8 10.464 Candidatus Angelobacter sp. 2976921 Bacteria Bacteria 87 2.6e-18   NR HZF36679.1 2976921 g44689 i0 57.5 1.0045871559633 73 30 99.1 1 1 216 184 256 HZF36679.1 hypothetical protein [Candidatus Angelobacter sp.] diamond 219 87 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia     Candidatus Angelobacter Candidatus Angelobacter sp.
29098054 29098054 PRJNA493828_P_NODE_20028_length_287_cov_2.887850_g19609_i0 PRJNA493828 20028 287 2.88785 8.2881295 Holophagaceae bacterium 2052165 Bacteria Bacteria 100 6.61e-23   NR MCE1204299.1 2052165 g19609 i0 70.1 1.4006968641115 67 20 70 0 286 86 287 353 MCE1204299.1 DegT/DnrJ/EryC1/StrS family aminotransferase [Holophagaceae bacterium] diamond 402 100 1 Bacteria   Pseudomonadati Acidobacteriota Holophagae Holophagales Holophagaceae   Holophagaceae bacterium
29287283 29287283 PRJNA493828_P_NODE_27809_length_262_cov_1.629630_g27390_i0 PRJNA493828 27809 262 1.62963 4.2696306 Bryobacteraceae bacterium 2212468 Bacteria Bacteria 77 1.81e-14   NR MBY0372684.1 2212468 g27390 i0 68.7 0.767175572519084 67 18 75.6 3 214 17 5 69 MBY0372684.1 DUF4384 domain-containing protein [Bryobacteraceae bacterium] diamond 201 77 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales Bryobacteraceae   Bryobacteraceae bacterium
29413614 29413614 PRJNA493828_P_NODE_6429_length_437_cov_2.447802_g6029_i0 PRJNA493828 6429 437 2.447802 10.69689474 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 192 1.03e-59   NR HQU85456.1 2283092 g6029 i0 80.9 0.933638443935927 136 23 93.4 1 1 408 16 148 HQU85456.1 prepilin-type N-terminal cleavage/methylation domain-containing protein [Pyrinomonadaceae bacterium] diamond 408 192 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
30756068 30756068 PRJNA493828_P_NODE_33914_length_248_cov_3.017143_g33495_i0 PRJNA493828 33914 248 3.017143 7.48251464 Bacteria 2 Bacteria Bacteria 55.8 9.09e-7   NR PYT34377.1 1978231 g33495 i0 62.8 4.59677419354839 43 16 52 0 248 120 277 319 PYT34377.1 MAG: aminotransferase [Acidobacteriota bacterium] diamond 1140 56.2 0.99288256227758 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
30961643 30961643 PRJNA493828_P_NODE_44334_length_225_cov_4.401316_g43915_i0 PRJNA493828 44334 225 4.401316 9.902961 Bryobacterales bacterium 2026791 Bacteria Bacteria 159 4.97e-49   NR MCC6537343.1 2026791 g43915 i0 98.7 1 75 1 100 0 1 225 16 90 MCC6537343.1 hypothetical protein [Bryobacterales bacterium] diamond 225 159 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales     Bryobacterales bacterium
30993208 30993208 PRJNA493828_P_NODE_23894_length_274_cov_1.955224_g23475_i0 PRJNA493828 23894 274 1.955224 5.35731376 Blastocatellia bacterium 2052146 Bacteria Bacteria 157 1.28e-46   NR NJM52123.1 2052146 g23475 i0 81.3 0.996350364963504 91 17 99.6 0 274 2 9 99 NJM52123.1 hypothetical protein [Blastocatellia bacterium] diamond 273 157 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia       Blastocatellia bacterium
31530832 31530832 PRJNA493828_P_NODE_29136_length_258_cov_2.718919_g28717_i0 PRJNA493828 29136 258 2.718919 7.01481102 Vicinamibacterales bacterium 2910147 Bacteria Bacteria 130 2.84e-35   NR HZJ32385.1 2910147 g28717 i0 74.1 3.75581395348837 81 21 94.2 0 15 257 26 106 HZJ32385.1 GDSL-type esterase/lipase family protein [Vicinamibacterales bacterium] diamond 969 130 1 Bacteria   Pseudomonadati Acidobacteriota Vicinamibacteria Vicinamibacterales     Vicinamibacterales bacterium
31562471 31562471 PRJNA493828_P_NODE_24256_length_273_cov_1.715000_g23837_i0 PRJNA493828 24256 273 1.715 4.68195 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 146 9.969999999999999e-43   NR MCD9187174.1 2283092 g23837 i0 100 0.791208791208791 72 0 79.1 0 57 272 1 72 MCD9187174.1 type VI secretion system tube protein Hcp [Pyrinomonadaceae bacterium] diamond 216 146 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
31846815 31846815 PRJNA493828_P_NODE_26797_length_265_cov_1.604167_g26378_i0 PRJNA493828 26797 265 1.604167 4.25104255 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 177 1.78e-49   NR MCD9185759.1 2283092 g26378 i0 96.4 0.950943396226415 84 3 95.1 0 5 256 604 687 MCD9185759.1 TonB-dependent receptor [Pyrinomonadaceae bacterium] diamond 252 177 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
31925763 31925763 PRJNA493828_P_NODE_42277_length_232_cov_3.509434_g41858_i0 PRJNA493828 42277 232 3.509434 8.14188688 Bacteria 2 Bacteria Bacteria 159 4.68e-43   NR MBM3727883.1 1978231 g41858 i0 100 3.98275862068966 77 0 99.6 0 232 2 193 269 MBM3727883.1 hypothetical protein [Acidobacteriota bacterium] diamond 924 159 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
32321845 32321845 PRJNA493828_P_NODE_19199_length_290_cov_3.138249_g18780_i0 PRJNA493828 19199 290 3.138249 9.1009221 Blastocatellia bacterium 2052146 Bacteria Bacteria 180 5.989999999999998e-55   NR MBL8181253.1 2052146 g18780 i0 97.9 0.993103448275862 96 2 99.3 0 288 1 102 197 MBL8181253.1 B-box zinc finger protein [Blastocatellia bacterium] diamond 288 180 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia       Blastocatellia bacterium
32448334 32448334 PRJNA493828_P_NODE_22979_length_277_cov_1.823529_g22560_i0 PRJNA493828 22979 277 1.823529 5.05117533 Acidobacteriota bacterium 1978231 Bacteria Bacteria 98.6 8.930000000000001e-22   NR PYR32917.1 1978231 g22560 i0 73.8 0.703971119133574 65 17 70.4 0 276 82 395 459 PYR32917.1 MAG: hypothetical protein DMF90_22550 [Acidobacteriota bacterium] diamond 195 98.6 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
32448344 32448344 PRJNA493828_P_NODE_35959_length_246_cov_0.890173_g35540_i0 PRJNA493828 35959 246 0.890173 2.18982558 Candidatus Sulfotelmatobacter sp. 2771375 Bacteria Bacteria 98.2 1.17e-21   NR HEY3620115.1 2771375 g35540 i0 55.6 0.98780487804878 81 36 98.8 0 245 3 375 455 HEY3620115.1 DPP IV N-terminal domain-containing protein [Candidatus Sulfotelmatobacter sp.] diamond 243 98.2 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Candidatus Korobacteraceae Candidatus Sulfotelmatobacter Candidatus Sulfotelmatobacter sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;