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contig_metadata

31 rows where analysis = "diamond", bioproject = "PRJNA493828" and tax_kingdom = "Fusobacteriati"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Fusobacteriati · 31 ✖

bioproject 1

  • PRJNA493828 · 31 ✖

analysis 1

  • diamond · 31 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
474848 474848 PRJNA493828_P_NODE_36541_length_245_cov_0.895349_g36122_i0 PRJNA493828 36541 245 0.895349 2.19360505 Cetobacterium somerae 188913 Bacteria Bacteria 168 6.27e-49   NR WP_257164202.1 188913 g36122 i0 100 0.991836734693878 81 0 99.2 0 245 3 127 207 WP_257164202.1 RNA-guided endonuclease InsQ/TnpB family protein [Cetobacterium somerae] diamond 243 168 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Cetobacterium Cetobacterium somerae
3025555 3025555 PRJNA493828_P_NODE_2603_length_658_cov_2.082051_g2262_i0 PRJNA493828 2603 658 2.082051 13.69989558 Cetobacterium somerae 188913 Bacteria Bacteria 385 2.2199999999999996e-131   NR WP_023051507.1 188913 g2262 i0 90.4 2.99544072948328 219 21 99.8 0 658 2 135 353 WP_023051507.1 cysteine desulfurase family protein [Cetobacterium somerae] diamond 1971 385 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Cetobacterium Cetobacterium somerae
8127832 8127832 PRJNA493828_P_NODE_34327_length_248_cov_0.880000_g33908_i0 PRJNA493828 34327 248 0.88 2.1824 unclassified Cetobacterium 2630983 Bacteria Bacteria 156 3.1699999999999993e-46   NR WP_047383748.1 2630983 g33908 i0 100 0.991935483870968 82 0 99.2 0 247 2 36 117 WP_047383748.1 MULTISPECIES: thiamine phosphate synthase [unclassified Cetobacterium] diamond 246 156 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Cetobacterium  
13228465 13228465 PRJNA493828_P_NODE_23851_length_274_cov_2.278607_g23432_i0 PRJNA493828 23851 274 2.278607 6.24338318 unclassified Cetobacterium 2630983 Bacteria Bacteria 177 1.2399999999999997e-54   NR WP_047383818.1 2630983 g23432 i0 98.9 0.996350364963504 91 1 99.6 0 273 1 17 107 WP_047383818.1 MULTISPECIES: 2-oxoacid:acceptor oxidoreductase family protein [unclassified Cetobacterium] diamond 273 177 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Cetobacterium  
17684430 17684430 PRJNA493828_P_NODE_42934_length_230_cov_2.452229_g42515_i0 PRJNA493828 42934 230 2.452229 5.6401267 Cetobacterium 180162 Bacteria Bacteria 109 3.64e-28   NR WP_332638013.1 2071632 g42515 i0 77.3 3.44347826086957 66 15 86.1 0 228 31 121 186 WP_332638013.1 iron-containing alcohol dehydrogenase, partial [Cetobacterium sp.] diamond 792 109 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Cetobacterium Cetobacterium sp.
20876525 20876525 PRJNA493828_P_NODE_32777_length_250_cov_0.870056_g32358_i0 PRJNA493828 32777 250 0.870056 2.17514 unclassified Cetobacterium 2630983 Bacteria Bacteria 136 2.6299999999999996e-37   NR WP_047382512.1 2630983 g32358 i0 98.6 0.888 74 1 88.8 0 223 2 1 74 WP_047382512.1 MULTISPECIES: N-acetylmuramic acid 6-phosphate etherase [unclassified Cetobacterium] diamond 222 136 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Cetobacterium  
23426895 23426895 PRJNA493828_P_NODE_13959_length_314_cov_1.178423_g13540_i0 PRJNA493828 13959 314 1.178423 3.70024822 Cetobacterium sp. ZWU 2071632 Bacteria Bacteria 204 2.18e-65   NR WP_052191665.1 1340502 g13540 i0 100 0.993630573248408 104 0 99.4 0 314 3 6 109 WP_052191665.1 pyridoxamine 5'-phosphate oxidase family protein [Cetobacterium sp. ZWU0022] diamond 312 204 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Cetobacterium Cetobacterium sp. ZWU0022
26633687 26633687 PRJNA493828_P_NODE_46461_length_208_cov_4.200000_g46042_i0 PRJNA493828 46461 208 4.2 8.736 Cetobacterium 180162 Bacteria Bacteria 119 1.4e-33   NR WP_291941138.1 180162 g46042 i0 90.6 0.764423076923077 53 5 76.4 0 161 3 1 53 WP_291941138.1 MULTISPECIES: rubredoxin [Cetobacterium] diamond 159 119 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Cetobacterium  
27329906 27329906 PRJNA493828_P_NODE_21623_length_282_cov_0.976077_g21204_i0 PRJNA493828 21623 282 0.976077 2.75253714 Cetobacterium sp. ZWU 2071632 Bacteria Bacteria 177 7.14e-52   NR WP_047382617.1 1340502 g21204 i0 97.8 0.98936170212766 93 2 98.9 0 3 281 3 95 WP_047382617.1 DEAD/DEAH box helicase [Cetobacterium sp. ZWU0022] diamond 279 177 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Cetobacterium Cetobacterium sp. ZWU0022
28150908 28150908 PRJNA493828_P_NODE_20145_length_287_cov_1.439252_g19726_i0 PRJNA493828 20145 287 1.439252 4.13065324 Cetobacterium somerae 188913 Bacteria Bacteria 184 9.42e-57   NR XLD83163.1 188913 g19726 i0 97.9 2.97909407665505 95 2 99.3 0 1 285 124 218 XLD83163.1 DegV family protein [Cetobacterium somerae] diamond 855 184 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Cetobacterium Cetobacterium somerae
28308692 28308692 PRJNA493828_P_NODE_39086_length_242_cov_0.881657_g38667_i0 PRJNA493828 39086 242 0.881657 2.13360994 unclassified Cetobacterium 2630983 Bacteria Bacteria 93.6 3.89e-20   NR WP_052191779.1 2630983 g38667 i0 95.7 0.582644628099174 47 2 58.3 0 142 2 20 66 WP_052191779.1 MULTISPECIES: GGDEF domain-containing protein [unclassified Cetobacterium] diamond 141 93.6 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Cetobacterium  
28371692 28371692 PRJNA493828_P_NODE_35846_length_246_cov_0.890173_g35427_i0 PRJNA493828 35846 246 0.890173 2.18982558 uncultured Fusobacterium sp. 159267 Bacteria Bacteria 122 1.91e-33   NR WP_294659097.1 159267 g35427 i0 98.5 0.817073170731707 67 1 81.7 0 241 41 77 143 WP_294659097.1 ExbD/TolR family protein [uncultured Fusobacterium sp.] diamond 201 122 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Fusobacterium uncultured Fusobacterium sp.
28403350 28403350 PRJNA493828_P_NODE_35886_length_246_cov_0.890173_g35467_i0 PRJNA493828 35886 246 0.890173 2.18982558 unclassified Cetobacterium 2630983 Bacteria Bacteria 111 2.5200000000000003e-27   NR WP_047384139.1 2630983 g35467 i0 100 0.695121951219512 57 0 69.5 0 245 75 274 330 WP_047384139.1 MULTISPECIES: dihydroxyacetone kinase subunit DhaK [unclassified Cetobacterium] diamond 171 111 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Cetobacterium  
28592876 28592876 PRJNA493828_P_NODE_37827_length_243_cov_1.664706_g37408_i0 PRJNA493828 37827 243 1.664706 4.04523558 Cetobacterium sp. ZWU 2071632 Bacteria Bacteria 125 2.89e-31   NR WP_047380875.1 1340502 g37408 i0 98.3 0.728395061728395 59 1 72.8 0 179 3 1 59 WP_047380875.1 leucine--tRNA ligase [Cetobacterium sp. ZWU0022] diamond 177 125 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Cetobacterium Cetobacterium sp. ZWU0022
28782034 28782034 PRJNA493828_P_NODE_34427_length_248_cov_0.880000_g34008_i0 PRJNA493828 34427 248 0.88 2.1824 unclassified Cetobacterium 2630983 Bacteria Bacteria 163 9.15e-49   NR WP_052191839.1 2630983 g34008 i0 98.8 0.991935483870968 82 1 99.2 0 3 248 40 121 WP_052191839.1 MULTISPECIES: 6-phosphogluconolactonase [unclassified Cetobacterium] diamond 246 163 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Cetobacterium  
28845197 28845197 PRJNA493828_P_NODE_47668_length_201_cov_5.367188_g47249_i0 PRJNA493828 47668 201 5.367188 10.78804788 Cetobacterium sp. ZWU 2071632 Bacteria Bacteria 102 1.03e-23   NR WP_047384236.1 1340502 g47249 i0 98.1 0.776119402985075 52 1 77.6 0 157 2 1 52 WP_047384236.1 sodium:solute symporter family protein [Cetobacterium sp. ZWU0022] diamond 156 102 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Cetobacterium Cetobacterium sp. ZWU0022
29271221 29271221 PRJNA493828_P_NODE_39089_length_242_cov_0.881657_g38670_i0 PRJNA493828 39089 242 0.881657 2.13360994 Cetobacterium 180162 Bacteria Bacteria 151 1.45e-40   NR WP_023051411.1 180162 g38670 i0 96.3 2.96280991735537 80 3 99.2 0 241 2 63 142 WP_023051411.1 MULTISPECIES: glycine--tRNA ligase subunit beta [Cetobacterium] diamond 717 151 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Cetobacterium  
29697441 29697441 PRJNA493828_P_NODE_8990_length_377_cov_2.111842_g8574_i0 PRJNA493828 8990 377 2.111842 7.96164434 unclassified Cetobacterium 2630983 Bacteria Bacteria 157 2.329999999999999e-47   NR WP_047380545.1 2630983 g8574 i0 100 0.628647214854111 79 0 62.9 0 239 3 1 79 WP_047380545.1 MULTISPECIES: hypothetical protein [unclassified Cetobacterium] diamond 237 157 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Cetobacterium  
30314184 30314184 PRJNA493828_P_NODE_22472_length_279_cov_1.116505_g22053_i0 PRJNA493828 22472 279 1.116505 3.11504895 Cetobacterium 180162 Bacteria Bacteria 171 3.47e-49   NR WP_297404315.1 527638 g22053 i0 91.3 2.96774193548387 92 8 98.9 0 277 2 52 143 WP_297404315.1 glucose-6-phosphate isomerase [uncultured Cetobacterium sp.] diamond 828 171 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Cetobacterium uncultured Cetobacterium sp.
30550725 30550725 PRJNA493828_P_NODE_39753_length_241_cov_0.916667_g39334_i0 PRJNA493828 39753 241 0.916667 2.20916747 unclassified Cetobacterium 2630983 Bacteria Bacteria 150 1.12e-41   NR WP_047381723.1 2630983 g39334 i0 100 0.921161825726141 74 0 92.1 0 2 223 328 401 WP_047381723.1 MULTISPECIES: dihydroorotase [unclassified Cetobacterium] diamond 222 150 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Cetobacterium  
30803558 30803558 PRJNA493828_P_NODE_48674_length_196_cov_5.869919_g48255_i0 PRJNA493828 48674 196 5.869919 11.50504124 Leptotrichia trevisanii 109328 Bacteria Bacteria 120 1.2699999999999998e-32   NR WP_026748680.1 109328 g48255 i0 92.3 0.994897959183674 65 5 99.5 0 195 1 68 132 WP_026748680.1 hypothetical protein [Leptotrichia trevisanii] diamond 195 120 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Leptotrichiaceae Leptotrichia Leptotrichia trevisanii
30898496 30898496 PRJNA493828_P_NODE_31114_length_253_cov_1.711111_g30695_i0 PRJNA493828 31114 253 1.711111 4.32911083 Cetobacterium sp. ZOR 2071632 Bacteria Bacteria 170 2.51e-50   NR WP_047395781.1 1339239 g30695 i0 100 0.984189723320158 83 0 98.4 0 3 251 65 147 WP_047395781.1 hypothetical protein [Cetobacterium sp. ZOR0034] diamond 249 170 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Cetobacterium Cetobacterium sp. ZOR0034
31372658 31372658 PRJNA493828_P_NODE_32036_length_251_cov_0.865169_g31617_i0 PRJNA493828 32036 251 0.865169 2.17157419 unclassified Cetobacterium 2630983 Bacteria Bacteria 146 1.44e-42   NR WP_047381419.1 2630983 g31617 i0 100 1.74501992031873 73 0 87.3 0 2 220 115 187 WP_047381419.1 MULTISPECIES: bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK [unclassified Cetobacterium] diamond 438 146 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Cetobacterium  
31562469 31562469 PRJNA493828_P_NODE_19876_length_288_cov_1.432558_g19457_i0 PRJNA493828 19876 288 1.432558 4.12576704 uncultured Cetobacterium sp. 527638 Bacteria Bacteria 182 5.49e-56   NR WP_294093762.1 527638 g19457 i0 95.8 0.989583333333333 95 4 99 0 2 286 111 205 WP_294093762.1 tRNA1(Val) (adenine(37)-N6)-methyltransferase [uncultured Cetobacterium sp.] diamond 285 182 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Cetobacterium uncultured Cetobacterium sp.
31562472 31562472 PRJNA493828_P_NODE_26216_length_267_cov_1.226804_g25797_i0 PRJNA493828 26216 267 1.226804 3.27556668 unclassified Cetobacterium 2630983 Bacteria Bacteria 181 1.53e-50   NR WP_047380348.1 2630983 g25797 i0 98.9 0.98876404494382 88 1 98.9 0 265 2 129 216 WP_047380348.1 MULTISPECIES: DNA polymerase III subunit alpha [unclassified Cetobacterium] diamond 264 181 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Cetobacterium  
31656965 31656965 PRJNA493828_P_NODE_38817_length_242_cov_0.911243_g38398_i0 PRJNA493828 38817 242 0.911243 2.20520806 uncultured Cetobacterium sp. 527638 Bacteria Bacteria 153 5.66e-41   NR WP_293721419.1 527638 g38398 i0 100 0.991735537190083 80 0 99.2 0 241 2 1855 1934 WP_293721419.1 hypothetical protein [uncultured Cetobacterium sp.] diamond 240 153 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Cetobacterium uncultured Cetobacterium sp.
31910209 31910209 PRJNA493828_P_NODE_39657_length_241_cov_0.916667_g39238_i0 PRJNA493828 39657 241 0.916667 2.20916747 Cetobacterium sp. ZOR 2071632 Bacteria Bacteria 164 1.1e-50   NR WP_047396395.1 1339239 g39238 i0 100 1.99170124481328 80 0 99.6 0 1 240 8 87 WP_047396395.1 DUF309 domain-containing protein [Cetobacterium sp. ZOR0034] diamond 480 164 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Cetobacterium Cetobacterium sp. ZOR0034
32100008 32100008 PRJNA493828_P_NODE_11938_length_335_cov_2.595420_g11519_i0 PRJNA493828 11938 335 2.59542 8.694657 unclassified Cetobacterium 2630983 Bacteria Bacteria 126 3.79e-35   NR WP_047381601.1 2630983 g11519 i0 100 0.823880597014925 92 0 82.4 0 329 54 1 92 WP_047381601.1 MULTISPECIES: hypothetical protein [unclassified Cetobacterium] diamond 276 126 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Cetobacterium  
32163495 32163495 PRJNA493828_P_NODE_26878_length_265_cov_1.177083_g26459_i0 PRJNA493828 26878 265 1.177083 3.11926995 unclassified Cetobacterium 2630983 Bacteria Bacteria 161 1.32e-46   NR WP_047382551.1 2630983 g26459 i0 100 0.883018867924528 78 0 88.3 0 3 236 262 339 WP_047382551.1 MULTISPECIES: 3-deoxy-7-phosphoheptulonate synthase [unclassified Cetobacterium] diamond 234 161 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Cetobacterium  
32353441 32353441 PRJNA493828_P_NODE_32879_length_250_cov_0.870056_g32460_i0 PRJNA493828 32879 250 0.870056 2.17514 Cetobacterium sp. ZWU 2071632 Bacteria Bacteria 155 1.63e-44   NR WP_369798251.1 1340502 g32460 i0 98.8 0.984 82 1 98.4 0 247 2 1 82 WP_369798251.1 LacI family DNA-binding transcriptional regulator [Cetobacterium sp. ZWU0022] diamond 246 155 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Cetobacterium Cetobacterium sp. ZWU0022
32606110 32606110 PRJNA493828_P_NODE_38220_length_243_cov_0.905882_g37801_i0 PRJNA493828 38220 243 0.905882 2.20129326 Cetobacterium sp. ZWU 2071632 Bacteria Bacteria 157 1.68e-44   NR WP_047383165.1 1340502 g37801 i0 100 0.962962962962963 78 0 96.3 0 6 239 1 78 WP_047383165.1 argininosuccinate synthase [Cetobacterium sp. ZWU0022] diamond 234 157 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Cetobacterium Cetobacterium sp. ZWU0022

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;