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contig_metadata

25 rows where analysis = "diamond", bioproject = "PRJNA493828" and tax_clade = "Amoebozoa"

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tax_phylum 2

tax_superkingdom 1

tax_clade 1

  • Amoebozoa · 25 ✖

bioproject 1

  • PRJNA493828 · 25 ✖

analysis 1

  • diamond · 25 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
24700383 24700383 PRJNA493828_P_NODE_11300_length_343_cov_1.403704_g10881_i0 PRJNA493828 11300 343 1.403704 4.81470472 Tieghemostelium lacteum 361077 Evosea other_Eukaryota 121 8.38e-32   NR KYQ94345.1 361077 g10881 i0 56.9 1.9067055393586 109 46 94.5 1 341 18 100 208 KYQ94345.1 40S ribosomal protein S8 [Tieghemostelium lacteum] diamond 654 121 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Raperosteliaceae Tieghemostelium Tieghemostelium lacteum
26601817 26601817 PRJNA493828_P_NODE_31561_length_252_cov_1.396648_g31142_i0 PRJNA493828 31561 252 1.396648 3.51955296 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 116 4.36e-28   NR PRP89338.1 1890364 g31142 i0 82.8 0.761904761904762 64 11 76.2 0 4 195 210 273 PRP89338.1 cobalamin synthesis protein P47K [Planoprotostelium fungivorum] diamond 192 116 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
26680872 26680872 PRJNA493828_P_NODE_29061_length_258_cov_4.037838_g28642_i0 PRJNA493828 29061 258 4.037838 10.41762204 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 51.2 4.41e-5   NR KAF2074982.1 133409 g28642 i0 34.8 1.68604651162791 69 39 77.9 3 243 43 11 75 KAF2074982.1 hypothetical protein CYY_003721 [Polysphondylium violaceum] diamond 435 51.6 0.992248062015504 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Polysphondylium Polysphondylium violaceum
26855614 26855614 PRJNA493828_P_NODE_7261_length_415_cov_1.125731_g6849_i0 PRJNA493828 7261 415 1.125731 4.67178365 Pelomyxa schiedti 1580589 Evosea other_Eukaryota 179 1.47e-54   NR KAH3743643.1 1580589 g6849 i0 63.7 0.975903614457831 135 48 97.6 1 407 3 1 134 KAH3743643.1 Rho GDP-dissociation inhibitor [Pelomyxa schiedti] diamond 405 179 1 Eukaryota Amoebozoa   Evosea   Pelobiontida Pelomyxidae Pelomyxa Pelomyxa schiedti
27013542 27013542 PRJNA493828_P_NODE_31342_length_252_cov_3.234637_g30923_i0 PRJNA493828 31342 252 3.234637 8.15128524 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 67.8 4.51e-11   NR PRP80227.1 1890364 g30923 i0 56.5 0.547619047619048 46 20 54.8 0 12 149 117 162 PRP80227.1 hypothetical protein PROFUN_12113 [Planoprotostelium fungivorum] diamond 138 67.8 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
27282234 27282234 PRJNA493828_P_NODE_35143_length_247_cov_0.885057_g34724_i0 PRJNA493828 35143 247 0.885057 2.18609079 Eumycetozoa 142796 Evosea other_Eukaryota 88.6 2.41e-18   NR XP_003291358.1 5786 g34724 i0 63 1.94331983805668 81 27 97.2 2 2 241 381 459 XP_003291358.1 actin binding protein [Dictyostelium purpureum] diamond 480 88.6 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
27534898 27534898 PRJNA493828_P_NODE_23883_length_274_cov_2.019900_g23464_i0 PRJNA493828 23883 274 2.0199 5.534526 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 42.7 0.0106   NR PRP89373.1 1890364 g23464 i0 60 0.799270072992701 35 14 38.3 0 267 163 7 41 PRP89373.1 hypothetical protein PROFUN_01236 [Planoprotostelium fungivorum] diamond 219 42.7 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
27598182 27598182 PRJNA493828_P_NODE_29724_length_257_cov_1.195652_g29305_i0 PRJNA493828 29724 257 1.195652 3.07282564 Eumycetozoa 142796 Evosea other_Eukaryota 92 2.02e-19   NR XP_003289233.1 5786 g29305 i0 47.6 4.90272373540856 84 44 98.1 0 2 253 366 449 XP_003289233.1 clathrin-adaptor gamma chain Ap1g1 [Dictyostelium purpureum] diamond 1260 92 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
27740601 27740601 PRJNA493828_P_NODE_37064_length_244_cov_1.678363_g36645_i0 PRJNA493828 37064 244 1.678363 4.09520572 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 72.4 1.32e-12   NR XP_004367485.1 1257118 g36645 i0 45.1 1.00819672131148 82 44 99.6 1 2 244 278 359 XP_004367485.1 histidine acid phosphatase superfamily protein [Acanthamoeba castellanii str. Neff] diamond 246 72.4 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
27992985 27992985 PRJNA493828_P_NODE_13325_length_320_cov_1.246964_g12906_i0 PRJNA493828 13325 320 1.246964 3.9902848 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 161 6.1e-49   NR XP_004339588.1 1257118 g12906 i0 88.2 0.796875 85 10 79.7 0 3 257 25 109 XP_004339588.1 60S ribosomal protein, putative [Acanthamoeba castellanii str. Neff] diamond 255 161 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
28797612 28797612 PRJNA493828_P_NODE_13287_length_320_cov_2.542510_g12868_i0 PRJNA493828 13287 320 2.54251 8.136032 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 102 1.8899999999999994e-23   NR KAF2077826.1 133409 g12868 i0 52.9 3.890625 102 42 95.6 3 320 15 183 278 KAF2077826.1 hypothetical protein CYY_000871 [Polysphondylium violaceum] diamond 1245 103 0.990291262135922 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Polysphondylium Polysphondylium violaceum
29271222 29271222 PRJNA493828_P_NODE_4049_length_539_cov_1.716738_g3668_i0 PRJNA493828 4049 539 1.716738 9.25321782 Eumycetozoa 142796 Evosea other_Eukaryota 103 5.3199999999999996e-24   NR KAF2072988.1 133409 g3668 i0 54.2 1.38589981447124 83 38 46.2 0 539 291 19 101 KAF2072988.1 hypothetical protein CYY_005700 [Polysphondylium violaceum] diamond 747 103 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Polysphondylium Polysphondylium violaceum
29539871 29539871 PRJNA493828_P_NODE_9310_length_371_cov_3.617450_g8893_i0 PRJNA493828 9310 371 3.61745 13.4207395 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 143 2.03e-40   NR PRP86688.1 1890364 g8893 i0 55.6 1.00269541778976 124 53 98.7 1 3 368 80 203 PRP86688.1 hypothetical protein PROFUN_05167 [Planoprotostelium fungivorum] diamond 372 143 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
29729178 29729178 PRJNA493828_P_NODE_25450_length_269_cov_2.178571_g25031_i0 PRJNA493828 25450 269 2.178571 5.86035599 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 59.7 4.25e-8   NR XP_004338074.1 1257118 g25031 i0 63.6 0.490706319702602 44 13 49.1 1 133 2 248 288 XP_004338074.1 TolAlike protein [Acanthamoeba castellanii str. Neff] diamond 132 59.7 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
29839747 29839747 PRJNA493828_P_NODE_35671_length_246_cov_1.335260_g35252_i0 PRJNA493828 35671 246 1.33526 3.2847396 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 63.2 2.03e-9   NR AFK80364.1 5755 g35252 i0 42.7 3.54878048780488 75 36 89 2 235 17 256 325 AFK80364.1 cysteine proteinase 3, partial [Acanthamoeba castellanii] diamond 873 63.2 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
30330138 30330138 PRJNA493828_P_NODE_22792_length_278_cov_1.102439_g22373_i0 PRJNA493828 22792 278 1.102439 3.06478042 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 116 3.55e-28   NR QVH35979.1 5755 g22373 i0 63.4 1.00359712230216 93 31 97.1 1 5 274 122 214 QVH35979.1 adenylyl cyclase-associated protein [Acanthamoeba castellanii] diamond 279 116 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
30393300 30393300 PRJNA493828_P_NODE_44773_length_221_cov_4.290541_g44354_i0 PRJNA493828 44773 221 4.290541 9.48209561 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 62.8 2.44e-9   NR PRP86956.1 1890364 g44354 i0 55.4 0.882352941176471 65 27 85.5 1 220 32 1084 1148 PRP86956.1 hypothetical protein PROFUN_04938 [Planoprotostelium fungivorum] diamond 195 62.8 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
30440208 30440208 PRJNA493828_P_NODE_13953_length_314_cov_1.278008_g13534_i0 PRJNA493828 13953 314 1.278008 4.01294512 Evosea 2605435 Evosea other_Eukaryota 111 7.870000000000001e-26   NR XP_644171.1 352472 g13534 i0 54.7 2.84713375796178 95 43 90.8 0 3 287 442 536 XP_644171.1 class VII unconventional myosin [Dictyostelium discoideum AX4] diamond 894 112 0.991071428571429 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
30456398 30456398 PRJNA493828_P_NODE_34453_length_248_cov_0.880000_g34034_i0 PRJNA493828 34453 248 0.88 2.1824 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 90.5 1.91e-21   NR XP_004344861.1 1257118 g34034 i0 76.8 0.67741935483871 56 13 67.7 0 177 10 19 74 XP_004344861.1 eukaryotic translation initiation factor 4e1a-binding protein [Acanthamoeba castellanii str. Neff] diamond 168 90.5 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
30550716 30550716 PRJNA493828_P_NODE_16313_length_309_cov_2.610169_g15894_i0 PRJNA493828 16313 309 2.610169 8.06542221 Entamoeba histolytica HM-1:IMSS 294381 Evosea other_Eukaryota 68.6 1.21e-12   NR XP_001913821.1 294381 g15894 i0 38.8 0.776699029126214 80 46 77.7 2 7 246 8 84 XP_001913821.1 uncharacterized protein EHI_095160 [Entamoeba histolytica HM-1:IMSS] diamond 240 68.6 1 Eukaryota Amoebozoa   Evosea   Mastigamoebida Entamoebidae Entamoeba Entamoeba histolytica
31182409 31182409 PRJNA493828_P_NODE_20075_length_287_cov_2.149533_g19656_i0 PRJNA493828 20075 287 2.149533 6.16915971 Dictyostelium purpureum 5786 Evosea other_Eukaryota 81.3 4.72e-17   NR XP_003286068.1 5786 g19656 i0 55.2 1.4006968641115 67 30 70 0 205 5 3 69 XP_003286068.1 uncharacterized protein DICPUDRAFT_94082 [Dictyostelium purpureum] diamond 402 81.3 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
31197918 31197918 PRJNA493828_P_NODE_27035_length_264_cov_2.418848_g26616_i0 PRJNA493828 27035 264 2.418848 6.38575872 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 128 4.429999999999999e-32   NR KAF2075235.1 133409 g26616 i0 65.9 1.85227272727273 82 28 93.2 0 262 17 586 667 KAF2075235.1 hypothetical protein CYY_003453 [Polysphondylium violaceum] diamond 489 129 0.992248062015504 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Polysphondylium Polysphondylium violaceum
31499170 31499170 PRJNA493828_P_NODE_44556_length_223_cov_4.266667_g44137_i0 PRJNA493828 44556 223 4.266667 9.51466741 Tieghemostelium lacteum 361077 Evosea other_Eukaryota 70.1 6.31e-12   NR KYQ88673.1 361077 g44137 i0 57.9 0.766816143497758 57 22 74 1 221 57 491 547 KYQ88673.1 putative cationic amino acid transporter [Tieghemostelium lacteum] diamond 171 70.1 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Raperosteliaceae Tieghemostelium Tieghemostelium lacteum
31577931 31577931 PRJNA493828_P_NODE_21576_length_282_cov_1.358852_g21157_i0 PRJNA493828 21576 282 1.358852 3.83196264 Eumycetozoa 142796 Evosea other_Eukaryota 115 2.27e-27   NR KAF2068463.1 133409 g21157 i0 69.5 1.74468085106383 82 25 87.2 0 279 34 745 826 KAF2068463.1 hypothetical protein CYY_010210 [Polysphondylium violaceum] diamond 492 115 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Polysphondylium Polysphondylium violaceum
31735845 31735845 PRJNA493828_P_NODE_27417_length_263_cov_2.121053_g26998_i0 PRJNA493828 27417 263 2.121053 5.57836939 Eumycetozoa 142796 Evosea other_Eukaryota 97.4 2.75e-22   NR XP_003287346.1 5786 g26998 i0 54 2.97718631178707 87 39 99.2 1 262 2 75 160 XP_003287346.1 uncharacterized protein DICPUDRAFT_97675 [Dictyostelium purpureum] diamond 783 97.4 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;