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contig_metadata

4 rows where analysis = "diamond", bioproject = "PRJNA493827" and tax_phylum = "Nitrososphaerota"

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tax_superkingdom 1

tax_phylum 1

  • Nitrososphaerota · 4 ✖

tax_kingdom 1

bioproject 1

  • PRJNA493827 · 4 ✖

analysis 1

  • diamond · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
24695902 24695902 PRJNA493827_P_NODE_121420_length_310_cov_1.624473_g119222_i0 PRJNA493827 121420 310 1.624473 5.0358663 root 1 Root_unresolved Root_unresolved 155 3e-41   NR MEM3062063.1 2026795 g119222 i0 68.6 5.92258064516129 102 32 98.7 0 3 308 253 354 MEM3062063.1 ribonucleoside-diphosphate reductase subunit alpha [Nitrososphaerota archaeon] diamond 1836 155 1 Archaea   Thermoproteati Nitrososphaerota         Nitrososphaerota archaeon
26792077 26792077 PRJNA493827_P_NODE_212481_length_245_cov_0.895349_g210283_i0 PRJNA493827 212481 245 0.895349 2.19360505 Candidatus Nitrosocosmicus sp. 2109671 Archaea Archaea 40.8 0.0389   NR HKR73056.1 2109671 g210283 i0 28.9 0.930612244897959 76 37 72.2 1 228 52 4 79 HKR73056.1 hypothetical protein [Candidatus Nitrosocosmicus sp.] diamond 228 40.8 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Candidatus Nitrosocosmicus Candidatus Nitrosocosmicus sp.
27076793 27076793 PRJNA493827_P_NODE_158182_length_272_cov_1.934673_g155984_i0 PRJNA493827 158182 272 1.934673 5.26231056 Nitrososphaeraceae archaeon 2169593 Archaea Archaea 66.6 3.47e-11   NR MCJ7638094.1 2169593 g155984 i0 40.7 0.893382352941177 81 48 89.3 0 2 244 100 180 MCJ7638094.1 aromatic amino acid lyase [Nitrososphaeraceae archaeon] diamond 243 66.6 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae   Nitrososphaeraceae archaeon
30550688 30550688 PRJNA493827_P_NODE_67213_length_425_cov_1.309659_g65016_i0 PRJNA493827 67213 425 1.309659 5.56605075 Nitrososphaerota archaeon 2026795 Archaea Archaea 169 1.1e-45   NR MEM3062063.1 2026795 g65016 i0 58.9 4.94823529411765 141 53 99.5 1 423 1 125 260 MEM3062063.1 ribonucleoside-diphosphate reductase subunit alpha [Nitrososphaerota archaeon] diamond 2103 169 1 Archaea   Thermoproteati Nitrososphaerota         Nitrososphaerota archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;