RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

4 rows where analysis = "diamond", bioproject = "PRJNA493827" and tax_phylum = "Nanobdellota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Nanobdellota · 4 ✖

tax_kingdom 1

bioproject 1

  • PRJNA493827 · 4 ✖

analysis 1

  • diamond · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7483455 7483455 PRJNA493827_P_NODE_216226_length_244_cov_1.508772_g214028_i0 PRJNA493827 216226 244 1.508772 3.68140368 Candidatus Nanoarchaeia archaeon 2910166 Archaea Archaea 96.3 4.59e-21   NR MDD3174963.1 2910166 g214028 i0 71.2 3.59016393442623 59 17 72.5 0 68 244 194 252 MDD3174963.1 lysine--tRNA ligase [Candidatus Nanoarchaeia archaeon] diamond 876 96.3 1 Archaea   Nanobdellati Nanobdellota Candidatus Nanoarchaeia       Candidatus Nanoarchaeia archaeon
17050592 17050592 PRJNA493827_P_NODE_5534_length_1828_cov_4.405698_g4745_i0 PRJNA493827 5534 1828 4.405698 80.53615944 Nanobdellota archaeon 2026764 Archaea Archaea 282 1.01e-85   NR MBU0536262.1 2026764 g4745 i0 49.5 2.15809628008753 329 156 53.8 5 823 1806 58 377 MBU0536262.1 NAD-dependent malic enzyme [Nanoarchaeota archaeon] diamond 3945 282 1 Archaea   Nanobdellati Nanobdellota         Nanobdellota archaeon
27202981 27202981 PRJNA493827_P_NODE_157562_length_273_cov_1.290000_g155364_i0 PRJNA493827 157562 273 1.29 3.5217 Nanobdellota archaeon 2026764 Archaea Archaea 73.6 1.27e-14   NR MCA9459619.1 2026764 g155364 i0 47.6 0.901098901098901 82 43 90.1 0 24 269 4 85 MCA9459619.1 rhodanese-like domain-containing protein [Nanoarchaeota archaeon] diamond 246 73.6 1 Archaea   Nanobdellati Nanobdellota         Nanobdellota archaeon
32099896 32099896 PRJNA493827_P_NODE_148738_length_281_cov_0.889423_g146540_i0 PRJNA493827 148738 281 0.889423 2.49927863 Nanobdellota archaeon 2026764 Archaea Archaea 44.3 0.0138   NR MEK6860013.1 2026764 g146540 i0 42.3 1.77224199288256 52 30 55.5 0 122 277 79 130 MEK6860013.1 50S ribosomal protein L2 [Nanoarchaeota archaeon] diamond 498 44.3 1 Archaea   Nanobdellati Nanobdellota         Nanobdellota archaeon

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;