RNAquarium Metadata Server
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contig_metadata

7 rows where analysis = "diamond", bioproject = "PRJNA493827" and tax_phylum = "Minisyncoccota"

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tax_superkingdom 1

tax_phylum 1

  • Minisyncoccota · 7 ✖

tax_clade 1

bioproject 1

  • PRJNA493827 · 7 ✖

analysis 1

  • diamond · 7 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28687755 28687755 PRJNA493827_P_NODE_72367_length_407_cov_2.733533_g70170_i0 PRJNA493827 72367 407 2.733533 11.12547931 Minisyncoccota bacterium 2053589 Bacteria Bacteria 190 1.65e-58   NR MFA5386796.1 2053589 g70170 i0 68.1 0.995085995085995 135 42 99.5 1 1 405 32 165 MFA5386796.1 DUF6682 family protein [Candidatus Paceibacterota bacterium] diamond 405 190 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
29129752 29129752 PRJNA493827_P_NODE_82769_length_378_cov_1.944262_g80571_i0 PRJNA493827 82769 378 1.944262 7.34931036 Minisyncoccota bacterium 2053589 Bacteria Bacteria 62.8 4.68e-10   NR MDR3572201.1 2053589 g80571 i0 64.6 0.380952380952381 48 17 38.1 0 67 210 40 87 MDR3572201.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 144 62.8 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
29192715 29192715 PRJNA493827_P_NODE_177289_length_256_cov_1.683060_g175091_i0 PRJNA493827 177289 256 1.68306 4.3086336 Minisyncoccota bacterium 2053589 Bacteria Bacteria 53.9 5.05e-6   NR MFA6353617.1 2053589 g175091 i0 39.5 0.94921875 81 43 90.2 2 245 15 1388 1466 MFA6353617.1 peptidoglycan-binding protein [Candidatus Paceibacterota bacterium] diamond 243 53.9 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
29823848 29823848 PRJNA493827_P_NODE_168111_length_264_cov_1.308901_g165913_i0 PRJNA493827 168111 264 1.308901 3.45549864 Minisyncoccota bacterium 2053589 Bacteria Bacteria 55.8 9.17e-7   NR MFA5937191.1 2053589 g165913 i0 43.3 0.681818181818182 60 34 68.2 0 224 45 28 87 MFA5937191.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 180 55.8 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
31056584 31056584 PRJNA493827_P_NODE_210715_length_246_cov_0.861272_g208517_i0 PRJNA493827 210715 246 0.861272 2.11872912 Minisyncoccota bacterium 2053589 Bacteria Bacteria 160 1.15e-47   NR HEY0948251.1 2053589 g208517 i0 96.3 1 82 3 100 0 246 1 77 158 HEY0948251.1 DUF2238 domain-containing protein [Candidatus Paceibacterota bacterium] diamond 246 160 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
31562413 31562413 PRJNA493827_P_NODE_25656_length_750_cov_6.859675_g23718_i0 PRJNA493827 25656 750 6.859675 51.4475625 Minisyncoccota bacterium 2053589 Bacteria Bacteria 81.3 3.94e-16   NR HRH31009.1 2053589 g23718 i0 66.1 0.224 56 19 22.4 0 619 452 10 65 HRH31009.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 168 81.3 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
32163404 32163404 PRJNA493827_P_NODE_187478_length_251_cov_0.865169_g185280_i0 PRJNA493827 187478 251 0.865169 2.17157419 Minisyncoccota bacterium 2053589 Bacteria Bacteria 76.3 1.34e-15   NR MEX0596480.1 2053589 g185280 i0 42.5 0.956175298804781 80 46 95.6 0 241 2 36 115 MEX0596480.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 240 76.3 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;