RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "diamond", bioproject = "PRJNA493827" and tax_phylum = "Duplornaviricota"

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tax_superkingdom 1

tax_phylum 1

  • Duplornaviricota · 4 ✖

tax_kingdom 1

bioproject 1

  • PRJNA493827 · 4 ✖

analysis 1

  • diamond · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27692956 27692956 PRJNA493827_P_NODE_185384_length_251_cov_0.865169_g183186_i0 PRJNA493827 185384 251 0.865169 2.17157419 Viruses 10239 Viruses Viruses 63.9 1.41e-9   NR UYL95680.1 2972361 g183186 i0 60 1.19521912350598 50 20 59.8 0 157 8 609 658 UYL95680.1 MAG: polyprotein [Dali Totiv tick virus 1] diamond 300 63.9 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Totiviridae   Dali Totiv tick virus 1
28940231 28940231 PRJNA493827_P_NODE_54668_length_479_cov_2.487685_g52476_i0 PRJNA493827 54668 479 2.487685 11.91601115 Jiangsu sediment cystovirus 2824307 Viruses Viruses 50.8 5.23e-4   NR QYF49681.1 2824307 g52476 i0 29.2 1.07098121085595 171 102 98.3 6 4 474 125 290 QYF49681.1 MAG: putative RNA-dependent RNA polymerase, partial [Jiangsu sediment cystovirus] diamond 513 50.8 1 Viruses   Orthornavirae Duplornaviricota Vidaverviricetes Mindivirales Cystoviridae Cystovirus Jiangsu sediment cystovirus
28971711 28971711 PRJNA493827_P_NODE_59028_length_458_cov_2.153247_g56832_i0 PRJNA493827 59028 458 2.153247 9.86187126 Pseudomonas phage phi12 161736 Viruses Viruses 278 7.989999999999999e-87   NR NP_690825.1 161736 g56832 i0 97.4 0.995633187772926 152 4 99.6 0 2 457 19 170 NP_690825.1 major core structural protein P1 [Pseudomonas phage phi12] diamond 456 278 1 Viruses   Orthornavirae Duplornaviricota Vidaverviricetes Mindivirales Cystoviridae Betacystovirus Betacystovirus phi12
32700297 32700297 PRJNA493827_P_NODE_144860_length_284_cov_1.459716_g142662_i0 PRJNA493827 144860 284 1.459716 4.14559344 Pseudomonas phage phi12 161736 Viruses Viruses 198 5.42e-58   NR NP_690823.1 161736 g142662 i0 96.8 0.992957746478873 94 3 99.3 0 284 3 493 586 NP_690823.1 RNA-dependent RNA polymerase P2 [Pseudomonas phage phi12] diamond 282 198 1 Viruses   Orthornavirae Duplornaviricota Vidaverviricetes Mindivirales Cystoviridae Betacystovirus Betacystovirus phi12

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;