RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA493827" and tax_phylum = "Candidatus Roizmaniibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Roizmaniibacteriota · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA493827 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27013510 27013510 PRJNA493827_P_NODE_58502_length_460_cov_6.069767_g56306_i0 PRJNA493827 58502 460 6.069767 27.9209282 Candidatus Roizmanbacteria bacterium 2282149 Bacteria Bacteria 193 1.8499999999999998e-60   NR MFS8160617.1 2282149 g56306 i0 75 20.55 136 32 88.7 1 458 51 2 135 MFS8160617.1 histone H3 [Candidatus Roizmanbacteria bacterium] diamond 9453 193 1 Bacteria Bacteria candidate phyla   Candidatus Roizmaniibacteriota         Candidatus Roizmanbacteria bacterium
30613796 30613796 PRJNA493827_P_NODE_190653_length_250_cov_0.870056_g188455_i0 PRJNA493827 190653 250 0.870056 2.17514 Candidatus Roizmanbacteria bacterium 2282149 Bacteria Bacteria 55.1 4.98e-7   NR NTU74393.1 2282149 g188455 i0 52.2 1.14 46 22 55.2 0 249 112 112 157 NTU74393.1 hypothetical protein [Candidatus Roizmanbacteria bacterium] diamond 285 55.1 1 Bacteria Bacteria candidate phyla   Candidatus Roizmaniibacteriota         Candidatus Roizmanbacteria bacterium
31182296 31182296 PRJNA493827_P_NODE_15555_length_1015_cov_2.813163_g13955_i0 PRJNA493827 15555 1015 2.813163 28.55360445 Candidatus Roizmanbacteria bacterium CG1 2282149 Bacteria Bacteria 48.1 0.0295   NR PJE63226.1 1974853 g13955 i0 47.7 0.443349753694581 44 23 13 0 398 267 167 210 PJE63226.1 MAG: aldehyde oxidoreductase, partial [Candidatus Roizmanbacteria bacterium CG10_big_fil_rev_8_21_14_0_10_39_6] diamond 450 48.1 1 Bacteria Bacteria candidate phyla   Candidatus Roizmaniibacteriota         Candidatus Roizmanbacteria bacterium CG10_big_fil_rev_8_21_14_0_10_39_6

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;